RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 CRHR1P34998 444 aa23.16■■□□□ 1.3
VEGFA-232ENST00000640653 FBXW4P57775 412 aa23.16■■□□□ 1.3
VEGFA-232ENST00000640653 RAE1P78406 368 aaKnown RBP23.16■■□□□ 1.3
VEGFA-232ENST00000640653 MGAT2Q10469 447 aa23.16■■□□□ 1.3
VEGFA-232ENST00000640653 HEPACAMQ14CZ8 416 aa23.16■■□□□ 1.3
VEGFA-232ENST00000640653 CFAP157Q5JU67 520 aa23.16■■□□□ 1.3
VEGFA-232ENST00000640653 ACAD11Q709F0 780 aa23.16■■□□□ 1.3
VEGFA-232ENST00000640653 SAMD14Q8IZD0 417 aaPredicted RBP23.16■■□□□ 1.3
VEGFA-232ENST00000640653 CCDC63Q8NA47 563 aa23.16■■□□□ 1.3
VEGFA-232ENST00000640653 RDH11Q8TC12 318 aa23.16■■□□□ 1.3
VEGFA-232ENST00000640653 SPPL2AQ8TCT8 520 aa23.16■■□□□ 1.3
VEGFA-232ENST00000640653 CNRIP1Q96F85 164 aaPredicted RBP23.16■■□□□ 1.3
VEGFA-232ENST00000640653 APIPQ96GX9 242 aa23.16■■□□□ 1.3
VEGFA-232ENST00000640653 ZNF681Q96N22 645 aa23.16■■□□□ 1.3
VEGFA-232ENST00000640653 HEY2Q9UBP5 337 aa23.16■■□□□ 1.3
VEGFA-232ENST00000640653 ACAD8Q9UKU7 415 aa23.16■■□□□ 1.3
VEGFA-232ENST00000640653 LRRC3CA6NJW4 275 aa23.15■■□□□ 1.3
VEGFA-232ENST00000640653 COPEO14579 308 aa23.15■■□□□ 1.3
VEGFA-232ENST00000640653 PLIN3O60664 434 aa23.15■■□□□ 1.3
VEGFA-232ENST00000640653 CDH16O75309 829 aa23.15■■□□□ 1.3
VEGFA-232ENST00000640653 CRCPO75575 148 aa23.15■■□□□ 1.3
VEGFA-232ENST00000640653 SNRPB2P08579 225 aaKnown RBP23.15■■□□□ 1.3
VEGFA-232ENST00000640653 RFPL3SP0C7P2 107 aa23.15■■□□□ 1.3
VEGFA-232ENST00000640653 ACVR2AP27037 513 aa23.15■■□□□ 1.3
VEGFA-232ENST00000640653 GSTM5P46439 218 aa23.15■■□□□ 1.3
VEGFA-232ENST00000640653 NAGLUP54802 743 aa23.15■■□□□ 1.3
VEGFA-232ENST00000640653 DNAJB13P59910 316 aa23.15■■□□□ 1.3
VEGFA-232ENST00000640653 EXOSC7Q15024 291 aaKnown RBP23.15■■□□□ 1.3
VEGFA-232ENST00000640653 WLSQ5T9L3 541 aa23.15■■□□□ 1.3
VEGFA-232ENST00000640653 ZNF585AQ6P3V2 769 aa23.15■■□□□ 1.3
VEGFA-232ENST00000640653 FRMD7Q6ZUT3 714 aa23.15■■□□□ 1.3
VEGFA-232ENST00000640653 ADCY4Q8NFM4 1077 aa23.15■■□□□ 1.3
VEGFA-232ENST00000640653 EPS8L3Q8TE67 593 aaKnown RBP23.15■■□□□ 1.3
VEGFA-232ENST00000640653 CTHRC1Q96CG8 243 aa23.15■■□□□ 1.3
VEGFA-232ENST00000640653 NXF5Q9H1B4 397 aaKnown RBP23.15■■□□□ 1.3
VEGFA-232ENST00000640653 GIMAP4Q9NUV9 329 aa23.15■■□□□ 1.3
VEGFA-232ENST00000640653 PRODH2Q9UF12 536 aa23.15■■□□□ 1.3
VEGFA-232ENST00000640653 DTX4Q9Y2E6 619 aa23.15■■□□□ 1.3
VEGFA-232ENST00000640653 EML6Q6ZMW3 1958 aa23.14■■□□□ 1.3
VEGFA-232ENST00000640653 C19orf84I3L1E1 186 aa23.14■■□□□ 1.29
VEGFA-232ENST00000640653 UBFD1O14562 309 aaKnown RBP23.14■■□□□ 1.29
VEGFA-232ENST00000640653 TRIM3O75382 744 aaPredicted RBP23.14■■□□□ 1.29
VEGFA-232ENST00000640653 SNX4O95219 450 aa23.14■■□□□ 1.29
VEGFA-232ENST00000640653 ABCD3P28288 659 aa23.14■■□□□ 1.29
VEGFA-232ENST00000640653 CHRNB4P30926 498 aa23.14■■□□□ 1.29
VEGFA-232ENST00000640653 DUSP2Q05923 314 aa23.14■■□□□ 1.29
VEGFA-232ENST00000640653 BTKQ06187 659 aa23.14■■□□□ 1.29
VEGFA-232ENST00000640653 PMPCAQ10713 525 aa23.14■■□□□ 1.29
VEGFA-232ENST00000640653 IMPG1Q17R60 797 aa23.14■■□□□ 1.29
VEGFA-232ENST00000640653 SPDYAQ5MJ70 313 aa23.14■■□□□ 1.29
VEGFA-232ENST00000640653 FAM180BQ6P0A1 224 aa23.14■■□□□ 1.29
VEGFA-232ENST00000640653 GALNT18Q6P9A2 607 aa23.14■■□□□ 1.29
VEGFA-232ENST00000640653 SCIMPQ6UWF3 145 aa23.14■■□□□ 1.29
VEGFA-232ENST00000640653 GDF7Q7Z4P5 450 aa23.14■■□□□ 1.29
VEGFA-232ENST00000640653 PRR22Q8IZ63 422 aa23.14■■□□□ 1.29
VEGFA-232ENST00000640653 LIX1Q8N485 282 aa23.14■■□□□ 1.29
VEGFA-232ENST00000640653 OR52R1Q8NGF1 315 aa23.14■■□□□ 1.29
VEGFA-232ENST00000640653 C16orf78Q8WTQ4 265 aa23.14■■□□□ 1.29
VEGFA-232ENST00000640653 HSPBAP1Q96EW2 488 aa23.14■■□□□ 1.29
VEGFA-232ENST00000640653 LCORQ96JN0 433 aaPredicted RBP23.14■■□□□ 1.29
VEGFA-232ENST00000640653 ITPAQ9BY32 194 aa23.14■■□□□ 1.29
VEGFA-232ENST00000640653 ACKR4Q9NPB9 350 aa23.14■■□□□ 1.29
VEGFA-232ENST00000640653 SIRT5Q9NXA8 310 aa23.14■■□□□ 1.29
VEGFA-232ENST00000640653 MID2Q9UJV3 735 aa23.14■■□□□ 1.29
VEGFA-232ENST00000640653 TEX15Q9BXT5 2789 aa23.13■■□□□ 1.29
VEGFA-232ENST00000640653 NOTCH2Q04721 2471 aa23.13■■□□□ 1.29
VEGFA-232ENST00000640653 ACOX3O15254 700 aa23.13■■□□□ 1.29
VEGFA-232ENST00000640653 WDR1O75083 606 aa23.13■■□□□ 1.29
VEGFA-232ENST00000640653 BCAS2O75934 225 aaPredicted RBP23.13■■□□□ 1.29
VEGFA-232ENST00000640653 CBX7O95931 251 aa23.13■■□□□ 1.29
VEGFA-232ENST00000640653 ANXA4P09525 319 aaPredicted RBP23.13■■□□□ 1.29
VEGFA-232ENST00000640653 PCSK2P16519 638 aa23.13■■□□□ 1.29
VEGFA-232ENST00000640653 NAGAP17050 411 aa23.13■■□□□ 1.29
VEGFA-232ENST00000640653 KRT4P19013 534 aa23.13■■□□□ 1.29
VEGFA-232ENST00000640653 GDF1P27539 372 aa23.13■■□□□ 1.29
VEGFA-232ENST00000640653 FOXA1P55317 472 aa23.13■■□□□ 1.29
VEGFA-232ENST00000640653 DCAF7P61962 342 aa23.13■■□□□ 1.29
VEGFA-232ENST00000640653 LTB4RQ15722 352 aa23.13■■□□□ 1.29
VEGFA-232ENST00000640653 PACS2Q86VP3 889 aa23.13■■□□□ 1.29
VEGFA-232ENST00000640653 CCDC116Q8IYX3 515 aa23.13■■□□□ 1.29
VEGFA-232ENST00000640653 RPRMLQ8N4K4 120 aa23.13■■□□□ 1.29
VEGFA-232ENST00000640653 ZNF675Q8TD23 568 aa23.13■■□□□ 1.29
VEGFA-232ENST00000640653 EXOSC8Q96B26 276 aaKnown RBP23.13■■□□□ 1.29
VEGFA-232ENST00000640653 RILPQ96NA2 401 aa23.13■■□□□ 1.29
VEGFA-232ENST00000640653 EBPLQ9BY08 206 aa23.13■■□□□ 1.29
VEGFA-232ENST00000640653 ANGPTL4Q9BY76 406 aa23.13■■□□□ 1.29
VEGFA-232ENST00000640653 SHCBP1LQ9BZQ2 653 aa23.13■■□□□ 1.29
VEGFA-232ENST00000640653 TNFRSF10DQ9UBN6 386 aa23.13■■□□□ 1.29
VEGFA-232ENST00000640653 RNF6Q9Y252 685 aa23.13■■□□□ 1.29
VEGFA-232ENST00000640653 PLLPQ9Y342 182 aa23.13■■□□□ 1.29
VEGFA-232ENST00000640653 PPM1BO75688 479 aa23.12■■□□□ 1.29
VEGFA-232ENST00000640653 CPA3P15088 417 aa23.12■■□□□ 1.29
VEGFA-232ENST00000640653 MASP1P48740 699 aa23.12■■□□□ 1.29
VEGFA-232ENST00000640653 NUP107P57740 925 aa23.12■■□□□ 1.29
VEGFA-232ENST00000640653 DUSP8Q13202 625 aa23.12■■□□□ 1.29
VEGFA-232ENST00000640653 NNATQ16517 81 aa23.12■■□□□ 1.29
VEGFA-232ENST00000640653 TRMT12Q53H54 448 aaKnown RBP23.12■■□□□ 1.29
VEGFA-232ENST00000640653 ZNF628Q5EBL2 1059 aa23.12■■□□□ 1.29
VEGFA-232ENST00000640653 B3GNT6Q6ZMB0 384 aa23.12■■□□□ 1.29
VEGFA-232ENST00000640653 SRRM1Q8IYB3 904 aaKnown RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms