RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 ERVK-11Q9UQG0 969 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 ZNF451Q9Y4E5 1061 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 CSAG2Q9Y5P2 127 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 A0A087WV62 115 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 C2orf92A0A1B0GVN3 265 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 OR6C76A6NM76 312 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 ATXN7O15265 892 aaPredicted RBP12.23□□□□□ -0.45
GTF3A-209ENST00000640289 CFLARO15519 480 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 PRAMEF2O60811 474 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 ITGA10O75578 1167 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 OR2J2O76002 312 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 PGRP06401 933 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 S100A3P33764 101 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 ATP4BP51164 291 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 POLR2JP52435 117 aaKnown RBP12.23□□□□□ -0.45
GTF3A-209ENST00000640289 HBA1P69905 142 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 SQLEQ14534 574 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 MLC1Q15049 377 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 DPY19L1Q2PZI1 675 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 COLEC12Q5KU26 742 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 ZNF468Q5VIY5 522 aaPredicted RBP12.23□□□□□ -0.45
GTF3A-209ENST00000640289 IGFL2Q6UWQ7 119 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 FUNDC1Q8IVP5 155 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 ARMC10Q8N2F6 343 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 OR2L13Q8N349 312 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 NATD1Q8N6N6 113 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 ZNF441Q8N8Z8 693 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 GLB1L3Q8NCI6 653 aaPredicted RBP12.23□□□□□ -0.45
GTF3A-209ENST00000640289 OR5L2Q8NGL0 311 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 NUBPLQ8TB37 319 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 OR5P2Q8WZ92 322 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 ERP27Q96DN0 273 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 WBP1Q96G27 269 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 LMF1Q96S06 567 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 TRIM4Q9C037 500 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 SLC25A18Q9H1K4 315 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 DDX18Q9NVP1 670 aaKnown RBP12.23□□□□□ -0.45
GTF3A-209ENST00000640289 CCDC167Q9P0B6 97 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 MYOTQ9UBF9 498 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 RALYQ9UKM9 306 aaKnown RBP12.23□□□□□ -0.45
GTF3A-209ENST00000640289 C19orf53Q9UNZ5 99 aaPredicted RBP12.23□□□□□ -0.45
GTF3A-209ENST00000640289 PCDHGB7Q9Y5F8 929 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 MED13Q9UHV7 2174 aa12.23□□□□□ -0.45
GTF3A-209ENST00000640289 PRSS51A0A1B0GVH4 220 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 RNASET2O00584 256 aaKnown RBP12.22□□□□□ -0.45
GTF3A-209ENST00000640289 BCAS2O75934 225 aaPredicted RBP12.22□□□□□ -0.45
GTF3A-209ENST00000640289 SLITRK5O94991 958 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 NADKO95544 446 aaPredicted RBP12.22□□□□□ -0.45
GTF3A-209ENST00000640289 CPSF4O95639 269 aaKnown RBP12.22□□□□□ -0.45
GTF3A-209ENST00000640289 NR0B1P51843 470 aaKnown RBP12.22□□□□□ -0.45
GTF3A-209ENST00000640289 PRKAG1P54619 331 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 NNATQ16517 81 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 TIGD2Q4W5G0 525 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 ANXA8L1Q5VT79 327 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 HLA-DQA1Q5Y7H0 255 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 SZRD1Q7Z422 152 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 SPATA21Q7Z572 469 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 WDR53Q7Z5U6 358 aaPredicted RBP12.22□□□□□ -0.45
GTF3A-209ENST00000640289 CPLX4Q7Z7G2 160 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 LGI4Q8N135 537 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 CLEC4FQ8N1N0 589 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 RBMXL3Q8N7X1 1067 aaKnown RBP12.22□□□□□ -0.45
GTF3A-209ENST00000640289 CATSPER1Q8NEC5 780 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 NUP43Q8NFH3 380 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 OR4A15Q8NGL6 344 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 OR5AK3PQ8NH89 298 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 ADIPOR1Q96A54 375 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 VPS33AQ96AX1 596 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 FAM120BQ96EK7 910 aaKnown RBP12.22□□□□□ -0.45
GTF3A-209ENST00000640289 OR52E6Q96RD3 313 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 RASL10BQ96S79 203 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 MFRPQ9BY79 579 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 FOLH1BQ9HBA9 442 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 TRIM33Q9UPN9 1127 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 HEMK1Q9Y5R4 338 aaPredicted RBP12.22□□□□□ -0.45
GTF3A-209ENST00000640289 SNX8Q9Y5X2 465 aa12.22□□□□□ -0.45
GTF3A-209ENST00000640289 CACNA1BQ00975 2339 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 MGAQ8IWI9 3026 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 FAM234BA2RU67 622 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 NR5A2O00482 541 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 FCHO1O14526 889 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 EMC8O43402 210 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 COQ9O75208 318 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 PSMG1O95456 288 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 IL6P05231 212 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 SOAT1P35610 550 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 CD96P40200 585 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 SOX3P41225 446 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 SSR4P51571 173 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 ARG2P78540 354 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 ZNF155Q12901 538 aaPredicted RBP12.21□□□□□ -0.45
GTF3A-209ENST00000640289 TUBA3CQ13748 450 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 UBAP2LQ14157 1087 aaKnown RBP12.21□□□□□ -0.45
GTF3A-209ENST00000640289 NADK2Q4G0N4 442 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 AGKQ53H12 422 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 PIGGQ5H8A4 983 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 METTL21CQ5VZV1 264 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 TUBA3EQ6PEY2 450 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 IGFL3Q6UXB1 125 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms