RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 UGT1A1P22309 533 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 EIF2S3P41091 472 aaKnown RBP6.78□□□□□ -1.32
NECAP1-220ENST00000639841 ALDH3B1P43353 468 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 CCR4P51679 360 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 HERV-K104P63124 156 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 BDH1Q02338 343 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 GRIK2Q13002 908 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 VEZF1Q14119 521 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 HERC3Q15034 1050 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 STX1AQ16623 288 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 PARP6Q2NL67 630 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 HKDC1Q2TB90 917 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 EIF2S3LQ2VIR3 472 aaKnown RBP6.78□□□□□ -1.32
NECAP1-220ENST00000639841 ZNF829Q3KNS6 432 aaPredicted RBP6.78□□□□□ -1.32
NECAP1-220ENST00000639841 DCAF4L1Q3SXM0 396 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 TMEM220Q6QAJ8 160 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 ZNF600Q6ZNG1 722 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 IL17RELQ6ZVW7 336 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 ARHGAP22Q7Z5H3 698 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 ZNF683Q8IZ20 524 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 RNF149Q8NC42 400 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 PDCD6IPQ8WUM4 868 aaKnown RBP6.78□□□□□ -1.32
NECAP1-220ENST00000639841 UBTD2Q8WUN7 234 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 FGF13Q92913 245 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 THAP7Q9BT49 309 aaPredicted RBP6.78□□□□□ -1.32
NECAP1-220ENST00000639841 NSRP1Q9H0G5 558 aaKnown RBP6.78□□□□□ -1.32
NECAP1-220ENST00000639841 IL26Q9NPH9 171 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 SDHAF3Q9NRP4 125 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 STX18Q9P2W9 335 aaKnown RBP6.78□□□□□ -1.32
NECAP1-220ENST00000639841 ERRFI1Q9UJM3 462 aaPredicted RBP6.78□□□□□ -1.32
NECAP1-220ENST00000639841 TBC1D24Q9ULP9 559 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 RUVBL2Q9Y230 463 aaKnown RBP6.78□□□□□ -1.32
NECAP1-220ENST00000639841 RHBDD3Q9Y3P4 386 aa6.78□□□□□ -1.32
NECAP1-220ENST00000639841 KMT2BQ9UMN6 2715 aaPredicted RBP6.78□□□□□ -1.32
NECAP1-220ENST00000639841 A0A096LPK6 155 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 PRSS51A0A1B0GVH4 220 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 C12orf71A8MTZ7 269 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.77□□□□□ -1.33
NECAP1-220ENST00000639841 TRDMT1O14717 391 aaKnown RBP6.77□□□□□ -1.33
NECAP1-220ENST00000639841 SYNGR4O95473 234 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 FURINP09958 794 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 SMIM18P0DKX4 95 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 LCN1P31025 176 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 SLC9A3P48764 834 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 P2RY14Q15391 338 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 ZC2HC1CQ53FD0 456 aaPredicted RBP6.77□□□□□ -1.33
NECAP1-220ENST00000639841 ZNF311Q5JNZ3 666 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 TEDDM1Q5T9Z0 273 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 PAQR7Q86WK9 346 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 ADGRG3Q86Y34 549 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 BLIDQ8IZY5 108 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 SLC38A9Q8NBW4 561 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 OR5M8Q8NGP6 311 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 RP9Q8TA86 221 aaKnown RBP6.77□□□□□ -1.33
NECAP1-220ENST00000639841 CCDC26Q8TAB7 109 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 KCNG3Q8TAE7 436 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 TBCKQ8TEA7 893 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 PAQR8Q8TEZ7 354 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 LRRC45Q96CN5 670 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 MMS19Q96T76 1030 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 MNTQ99583 582 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 ANKRD60Q9BZ19 345 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 MRPL47Q9HD33 250 aaKnown RBP6.77□□□□□ -1.33
NECAP1-220ENST00000639841 SLC38A7Q9NVC3 462 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 AHSPQ9NZD4 102 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 ADAM21Q9UKJ8 722 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 TRGV11A0A075B6L2 103 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 RNF222A6NCQ9 220 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 NPIPA2E9PIF3 369 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 SLC16A5O15375 505 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 LCMT2O60294 686 aaKnown RBP6.77□□□□□ -1.33
NECAP1-220ENST00000639841 RFPL2O75678 378 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 IGFBP1P08833 259 aaPredicted RBP6.77□□□□□ -1.33
NECAP1-220ENST00000639841 TFPIP10646 304 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 MAOAP21397 527 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 YWHABP31946 246 aaKnown RBP6.77□□□□□ -1.33
NECAP1-220ENST00000639841 APOBEC1P41238 236 aaKnown RBP6.77□□□□□ -1.33
NECAP1-220ENST00000639841 SLC6A8P48029 635 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 UBE2IP63279 158 aaKnown RBP6.77□□□□□ -1.33
NECAP1-220ENST00000639841 MAT1AQ00266 395 aaKnown RBP6.77□□□□□ -1.33
NECAP1-220ENST00000639841 FGL1Q08830 312 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 PNRC1Q12796 327 aaPredicted RBP6.77□□□□□ -1.33
NECAP1-220ENST00000639841 TMEM44Q2T9K0 475 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 C16orf62Q7Z3J2 963 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 SPRED1Q7Z699 444 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 GRASPQ7Z6J2 395 aaPredicted RBP6.77□□□□□ -1.33
NECAP1-220ENST00000639841 PALB2Q86YC2 1186 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 SPEM1Q8N4L4 309 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 SVOPQ8N4V2 548 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 FAM81AQ8TBF8 368 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 GRHL3Q8TE85 626 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 GLYATL2Q8WU03 294 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 PIGCQ92535 297 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 PHYHIPQ92561 330 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 MRPL53Q96EL3 112 aaKnown RBP6.77□□□□□ -1.33
NECAP1-220ENST00000639841 MARK4Q96L34 752 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 VPS35Q96QK1 796 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 TRMT61BQ9BVS5 477 aaKnown RBP6.77□□□□□ -1.33
NECAP1-220ENST00000639841 TRIM9Q9C026 710 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 P2RX2Q9UBL9 471 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms