RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 CDC26Q8NHZ8 85 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 C16orf78Q8WTQ4 265 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 PHF10Q8WUB8 498 aaKnown RBP16.28■□□□□ 0.2
PNKP-230ENST00000638016 DIO2Q92813 273 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 C11orf24Q96F05 449 aaPredicted RBP16.28■□□□□ 0.2
PNKP-230ENST00000638016 FAIM2Q9BWQ8 316 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 SLC6A15Q9H2J7 730 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 PFDN4Q9NQP4 134 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 NMRK1Q9NWW6 199 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 EHD3Q9NZN3 535 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.28■□□□□ 0.2
PNKP-230ENST00000638016 ZNF639Q9UID6 485 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 NPFFR2Q9Y5X5 522 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 V9GYY5 206 aaPredicted RBP16.28■□□□□ 0.2
PNKP-230ENST00000638016 ADGRG4Q8IZF6 3080 aa16.27■□□□□ 0.2
PNKP-230ENST00000638016 TLDC2A0PJX2 215 aa16.27■□□□□ 0.2
PNKP-230ENST00000638016 COPEO14579 308 aa16.27■□□□□ 0.2
PNKP-230ENST00000638016 CLDN14O95500 239 aa16.27■□□□□ 0.2
PNKP-230ENST00000638016 ABCD3P28288 659 aa16.27■□□□□ 0.2
PNKP-230ENST00000638016 TRA2BP62995 288 aaKnown RBP16.27■□□□□ 0.2
PNKP-230ENST00000638016 MAP4K2Q12851 820 aa16.27■□□□□ 0.2
PNKP-230ENST00000638016 RPS6KA2Q15349 733 aa16.27■□□□□ 0.2
PNKP-230ENST00000638016 GXYLT1Q4G148 440 aa16.27■□□□□ 0.2
PNKP-230ENST00000638016 CLEC6AQ6EIG7 209 aa16.27■□□□□ 0.2
PNKP-230ENST00000638016 RGS9BPQ6ZS82 235 aa16.27■□□□□ 0.2
PNKP-230ENST00000638016 SRRM1Q8IYB3 904 aaKnown RBP16.27■□□□□ 0.2
PNKP-230ENST00000638016 CCDC116Q8IYX3 515 aa16.27■□□□□ 0.2
PNKP-230ENST00000638016 LRRC25Q8N386 305 aaPredicted RBP16.27■□□□□ 0.2
PNKP-230ENST00000638016 GBP7Q8N8V2 638 aaPredicted RBP16.27■□□□□ 0.2
PNKP-230ENST00000638016 OR7G1Q8NGA0 311 aa16.27■□□□□ 0.2
PNKP-230ENST00000638016 OR9A2Q8NGT5 310 aa16.27■□□□□ 0.2
PNKP-230ENST00000638016 SPPL2AQ8TCT8 520 aa16.27■□□□□ 0.2
PNKP-230ENST00000638016 KAT2AQ92830 837 aa16.27■□□□□ 0.2
PNKP-230ENST00000638016 TP53INP1Q96A56 240 aa16.27■□□□□ 0.2
PNKP-230ENST00000638016 CTHRC1Q96CG8 243 aa16.27■□□□□ 0.2
PNKP-230ENST00000638016 DOHHQ9BU89 302 aa16.27■□□□□ 0.2
PNKP-230ENST00000638016 ZFP64Q9NPA5 681 aa16.27■□□□□ 0.2
PNKP-230ENST00000638016 STK38LQ9Y2H1 464 aa16.27■□□□□ 0.2
PNKP-230ENST00000638016 POLR3HQ9Y535 204 aaPredicted RBP16.27■□□□□ 0.2
PNKP-230ENST00000638016 INTS1Q8N201 2190 aaKnown RBP16.27■□□□□ 0.19
PNKP-230ENST00000638016 A0A1B0GVC2 190 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 CPA3P15088 417 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 AGAP20933 346 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 TRPC1P48995 793 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 NUP107P57740 925 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 SLC18A2Q05940 514 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 PCLAFQ15004 111 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 CCDC153Q494R4 210 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 SPIN4Q56A73 249 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 ZNF628Q5EBL2 1059 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 SPDYAQ5MJ70 313 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 FNDC7Q5VTL7 733 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 ZNF585AQ6P3V2 769 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 CCDC71Q8IV32 467 aaPredicted RBP16.26■□□□□ 0.19
PNKP-230ENST00000638016 C10orf107Q8IVU9 208 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 MCEMP1Q8IX19 187 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 SLC34A3Q8N130 599 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 TP63Q9H3D4 680 aaPredicted RBP16.26■□□□□ 0.19
PNKP-230ENST00000638016 LDAHQ9H6V9 325 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 EXO5Q9H790 373 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 OXSMQ9NWU1 459 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 CNIH4Q9P003 139 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 GRID1Q9ULK0 1009 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 BOKQ9UMX3 212 aaPredicted RBP16.26■□□□□ 0.19
PNKP-230ENST00000638016 FIS1Q9Y3D6 152 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 FAM215AQ9Y5M1 114 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 ZNF780BQ9Y6R6 833 aa16.26■□□□□ 0.19
PNKP-230ENST00000638016 TRGV5A0A0B4J1U4 118 aa16.25■□□□□ 0.19
PNKP-230ENST00000638016 FAM90A27PA6NNH2 459 aa16.25■□□□□ 0.19
PNKP-230ENST00000638016 AQP7O14520 342 aa16.25■□□□□ 0.19
PNKP-230ENST00000638016 CDH16O75309 829 aa16.25■□□□□ 0.19
PNKP-230ENST00000638016 TRIM3O75382 744 aaPredicted RBP16.25■□□□□ 0.19
PNKP-230ENST00000638016 CCT5P48643 541 aa16.25■□□□□ 0.19
PNKP-230ENST00000638016 MAN2A2P49641 1150 aa16.25■□□□□ 0.19
PNKP-230ENST00000638016 EMDP50402 254 aa16.25■□□□□ 0.19
PNKP-230ENST00000638016 DNAJB13P59910 316 aa16.25■□□□□ 0.19
PNKP-230ENST00000638016 PMPCAQ10713 525 aa16.25■□□□□ 0.19
PNKP-230ENST00000638016 SLC10A1Q14973 349 aa16.25■□□□□ 0.19
PNKP-230ENST00000638016 CFAP157Q5JU67 520 aa16.25■□□□□ 0.19
PNKP-230ENST00000638016 RTL6Q6ICC9 239 aa16.25■□□□□ 0.19
PNKP-230ENST00000638016 PAOXQ6QHF9 649 aa16.25■□□□□ 0.19
PNKP-230ENST00000638016 CCDC126Q96EE4 140 aa16.25■□□□□ 0.19
PNKP-230ENST00000638016 RILPQ96NA2 401 aa16.25■□□□□ 0.19
PNKP-230ENST00000638016 NODALQ96S42 347 aa16.25■□□□□ 0.19
PNKP-230ENST00000638016 UCK2Q9BZX2 261 aa16.25■□□□□ 0.19
PNKP-230ENST00000638016 EXO1Q9UQ84 846 aaKnown RBP16.25■□□□□ 0.19
PNKP-230ENST00000638016 RNF6Q9Y252 685 aa16.25■□□□□ 0.19
PNKP-230ENST00000638016 KIAA1549Q9HCM3 1950 aa16.24■□□□□ 0.19
PNKP-230ENST00000638016 LRBAP50851 2863 aa16.24■□□□□ 0.19
PNKP-230ENST00000638016 NKX2-6A6NCS4 301 aa16.24■□□□□ 0.19
PNKP-230ENST00000638016 C2orf72A6NCS6 295 aa16.24■□□□□ 0.19
PNKP-230ENST00000638016 SPAG7O75391 227 aa16.24■□□□□ 0.19
PNKP-230ENST00000638016 ABCB1P08183 1280 aaPredicted RBP16.24■□□□□ 0.19
PNKP-230ENST00000638016 ANXA4P09525 319 aaPredicted RBP16.24■□□□□ 0.19
PNKP-230ENST00000638016 GDF1P27539 372 aa16.24■□□□□ 0.19
PNKP-230ENST00000638016 CORO7P57737 925 aa16.24■□□□□ 0.19
PNKP-230ENST00000638016 IMPG1Q17R60 797 aa16.24■□□□□ 0.19
PNKP-230ENST00000638016 LIPMQ5VYY2 423 aa16.24■□□□□ 0.19
PNKP-230ENST00000638016 GALNT18Q6P9A2 607 aa16.24■□□□□ 0.19
PNKP-230ENST00000638016 TICAM1Q8IUC6 712 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms