RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 SPHK1Q9NYA1 384 aa11.43□□□□□ -0.58
CLN8-212ENST00000637083 SELENONQ9NZV5 590 aa11.43□□□□□ -0.58
CLN8-212ENST00000637083 CCDC59Q9P031 241 aaKnown RBP11.43□□□□□ -0.58
CLN8-212ENST00000637083 ANKMY1Q9P2S6 941 aa11.43□□□□□ -0.58
CLN8-212ENST00000637083 NUMA1Q14980 2115 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.42□□□□□ -0.58
CLN8-212ENST00000637083 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.42□□□□□ -0.58
CLN8-212ENST00000637083 IRGMA1A4Y4 181 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 PRAMEF27A3QJZ7 478 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 GLOD5A6NK44 160 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 TOR1BO14657 336 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 PGRMC2O15173 223 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 KLF8O95600 359 aaPredicted RBP11.42□□□□□ -0.58
CLN8-212ENST00000637083 ALPPP05187 535 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 HNRNPCP07910 306 aaKnown RBP eCLIP11.42□□□□□ -0.58
CLN8-212ENST00000637083 ALOX5P09917 674 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 NR2F6P10588 404 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 GADD45AP24522 165 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 CD40LGP29965 261 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 CSTF2P33240 577 aaKnown RBP eCLIP11.42□□□□□ -0.58
CLN8-212ENST00000637083 IDUAP35475 653 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 SLC15A1P46059 708 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 RAB8AP61006 207 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 MRPS21P82921 87 aaKnown RBP11.42□□□□□ -0.58
CLN8-212ENST00000637083 RHAGQ02094 409 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 SEC23BQ15437 767 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 TRIM16LQ309B1 348 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 RNLSQ5VYX0 342 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 SLC7A13Q8TCU3 470 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 RPL3LQ92901 407 aaKnown RBP11.42□□□□□ -0.58
CLN8-212ENST00000637083 UCN3Q969E3 161 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 TMEM80Q96HE8 168 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 DACH2Q96NX9 599 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 TRNT1Q96Q11 434 aaKnown RBP11.42□□□□□ -0.58
CLN8-212ENST00000637083 FUZQ9BT04 418 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 PRRG3Q9BZD7 231 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 SLIRPQ9GZT3 109 aaKnown RBP11.42□□□□□ -0.58
CLN8-212ENST00000637083 ANKRD19PQ9H560 264 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 SLC25A19Q9HC21 320 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 C11orf16Q9NQ32 467 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 GIN1Q9NXP7 522 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 SCHIP1Q9P0W5 487 aaPredicted RBP11.42□□□□□ -0.58
CLN8-212ENST00000637083 APOBEC3BQ9UH17 382 aaKnown RBP11.42□□□□□ -0.58
CLN8-212ENST00000637083 MKLN1Q9UL63 735 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 IFT52Q9Y366 437 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 ATG2AQ2TAZ0 1938 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 F5P12259 2224 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 A0A1W2PQF6 199 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 TAF4O00268 1085 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 CCRL2O00421 344 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 MAGEB3O15480 346 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 PTHP01270 115 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 DRD1P21728 446 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 CD72P21854 359 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 TLX1P31314 330 aaPredicted RBP11.42□□□□□ -0.58
CLN8-212ENST00000637083 S100A5P33763 92 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 SOX6P35712 828 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 FEN1P39748 380 aaKnown RBP11.42□□□□□ -0.58
CLN8-212ENST00000637083 YPEL5P62699 121 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 BTN3A2P78410 334 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 FOXD4Q12950 439 aaPredicted RBP11.42□□□□□ -0.58
CLN8-212ENST00000637083 PIN1Q13526 163 aaPredicted RBP11.42□□□□□ -0.58
CLN8-212ENST00000637083 ATP1A4Q13733 1029 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 MED22Q15528 200 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 GPR19Q15760 415 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 ZNF311Q5JNZ3 666 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 C1orf94Q6P1W5 598 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 PODNL1Q6PEZ8 512 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 TMEM107Q6UX40 140 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 RBM45Q8IUH3 476 aaKnown RBP11.42□□□□□ -0.58
CLN8-212ENST00000637083 FAM20CQ8IXL6 584 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 OR4D11Q8NGI4 311 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 WDR36Q8NI36 951 aaKnown RBP11.42□□□□□ -0.58
CLN8-212ENST00000637083 ADAMTS15Q8TE58 950 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 ZFPM2Q8WW38 1151 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 ELP4Q96EB1 424 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 OR7D2Q96RA2 312 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 SERINC2Q96SA4 455 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 MGLLQ99685 303 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 POLDIP3Q9BY77 421 aaKnown RBP11.42□□□□□ -0.58
CLN8-212ENST00000637083 ACTRT3Q9BYD9 372 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 DSN1Q9H410 356 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 TBC1D29Q9UFV1 150 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 KLF15Q9UIH9 416 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 DAPK2Q9UIK4 370 aa11.42□□□□□ -0.58
CLN8-212ENST00000637083 SAGE2PA6NJ88 616 aa11.41□□□□□ -0.58
CLN8-212ENST00000637083 LRRC72A6NJI9 287 aa11.41□□□□□ -0.58
CLN8-212ENST00000637083 M0R3H8 397 aa11.41□□□□□ -0.58
CLN8-212ENST00000637083 ADAM23O75077 832 aa11.41□□□□□ -0.58
CLN8-212ENST00000637083 CHRM4P08173 479 aa11.41□□□□□ -0.58
CLN8-212ENST00000637083 HSMCR30P0CW71 290 aa11.41□□□□□ -0.58
CLN8-212ENST00000637083 HNRNPA2B1P22626 353 aaKnown RBP11.41□□□□□ -0.58
CLN8-212ENST00000637083 CTHP32929 405 aa11.41□□□□□ -0.58
CLN8-212ENST00000637083 PPP5CP53041 499 aa11.41□□□□□ -0.58
CLN8-212ENST00000637083 SLC25A30Q5SVS4 291 aa11.41□□□□□ -0.58
CLN8-212ENST00000637083 MFSD4BQ5TF39 518 aa11.41□□□□□ -0.58
CLN8-212ENST00000637083 C18orf63Q68DL7 685 aa11.41□□□□□ -0.58
CLN8-212ENST00000637083 GDPGP1Q6ZNW5 385 aa11.41□□□□□ -0.58
CLN8-212ENST00000637083 C16orf62Q7Z3J2 963 aa11.41□□□□□ -0.58
CLN8-212ENST00000637083 OR4K5Q8NGD3 323 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms