RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 FRMPD1Q5SYB0 1578 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 AFDNP55196 1824 aaKnown RBP17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 A0A087WUU8 490 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 GOSR2O14653 212 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 AHSGP02765 367 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 GPIP06744 558 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 DPP6P42658 865 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 AARDQ4LEZ3 155 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 RABL3Q5HYI8 236 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 CANT1Q8WVQ1 401 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 BSCL2Q96G97 398 aaPredicted RBP17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 OR5B12Q96R08 314 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 LIN28AQ9H9Z2 209 aaKnown RBP17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 ZNF160Q9HCG1 818 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 LRFN1Q9P244 771 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 MEIS3P2A8K0S8 358 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 TGM5O43548 720 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 PRMT2P55345 433 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 HSD17B12Q53GQ0 312 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 OR2A12Q8NGT7 310 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 CNIH3Q8TBE1 160 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 CHFRQ96EP1 664 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 SECISBP2Q96T21 854 aaKnown RBP17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 MRIQ9BWK5 157 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 IL23AQ9NPF7 189 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 HEBP1Q9NRV9 189 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 DHCR24Q15392 516 aa17.02■□□□□ 0.31
CACNA1A-227ENST00000636549 CATSPEREQ5SY80 951 aa17.02■□□□□ 0.31
CACNA1A-227ENST00000636549 DUS1LQ6P1R4 473 aaKnown RBP17.02■□□□□ 0.31
CACNA1A-227ENST00000636549 LARP4Q71RC2 724 aaKnown RBP eCLIP17.02■□□□□ 0.31
CACNA1A-227ENST00000636549 THOC3Q96J01 351 aaKnown RBP17.02■□□□□ 0.31
CACNA1A-227ENST00000636549 RBPJQ06330 500 aa17.02■□□□□ 0.31
CACNA1A-227ENST00000636549 PLEKHS1Q5SXH7 462 aa17.02■□□□□ 0.31
CACNA1A-227ENST00000636549 OR6C4Q8NGE1 309 aa17.02■□□□□ 0.31
CACNA1A-227ENST00000636549 OR52P1PQ8NH57 321 aa17.02■□□□□ 0.31
CACNA1A-227ENST00000636549 ITPAQ9BY32 194 aa17.02■□□□□ 0.31
CACNA1A-227ENST00000636549 LRRC3Q9BY71 257 aa17.02■□□□□ 0.31
CACNA1A-227ENST00000636549 C14orf119Q9NWQ9 140 aa17.02■□□□□ 0.31
CACNA1A-227ENST00000636549 KRBA1A5PL33 1030 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 MAN2B1O00754 1011 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 NDUFA6P56556 154 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 SLC39A5Q6ZMH5 540 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 TECPR1Q7Z6L1 1165 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 PIGCQ92535 297 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 ROPN1LQ96C74 230 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 DCSTAMPQ9H295 470 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 HIPK2Q9H2X6 1198 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 ERVK13-1Q9NX77 482 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 SCP2D1Q9UJQ7 156 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 AJAP1Q9UKB5 411 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 PREX1Q8TCU6 1659 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 A0A0G2JMP0 313 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 CREG1O75629 220 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 GINS1Q14691 196 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 ARL14Q8N4G2 192 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 OR4M2Q8NGB6 313 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 TUBG2Q9NRH3 451 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 TAS2R3Q9NYW6 316 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 LCN1P31025 176 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 CD79BP40259 229 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 SEC61A1P61619 476 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 ASRGL1Q7L266 308 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 LRRC25Q8N386 305 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 TOE1Q96GM8 510 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 IGSF21Q96ID5 467 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 SMIM3Q9BZL3 60 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 EXTL2Q9UBQ6 330 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 KCNC1P48547 511 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 GPR33Q49SQ1 333 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 OR2T5Q6IEZ7 315 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 IQCF1Q8N6M8 205 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 OR2T29Q8NH02 315 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 C10orf82Q8WW14 230 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 GAB3Q8WWW8 586 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 SORBS1Q9BX66 1292 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 AQP2P41181 271 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 AGFG1P52594 562 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 KHDC1Q4VXA5 237 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 C6orf141Q5SZD1 244 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 OR4C11Q6IEV9 310 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 RNF175Q8N4F7 328 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 FUCA2Q9BTY2 467 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 OPA3Q9H6K4 179 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 AGAP5A6NIR3 686 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 ASTE1Q2TB18 679 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 PAMR1Q6UXH9 720 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 MOB3CQ70IA8 216 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 TSPAN33Q86UF1 283 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 ZNF695Q8IW36 515 aa17.01■□□□□ 0.31
CACNA1A-227ENST00000636549 ADRB3P13945 408 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 CELP19835 753 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 SFRP5Q5T4F7 317 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 SFRP4Q6FHJ7 346 aaPredicted RBP17■□□□□ 0.31
CACNA1A-227ENST00000636549 TMEM25Q86YD3 366 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 CALHM2Q9HA72 323 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 ARNT2Q9HBZ2 717 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 TIMM8AO60220 97 aaPredicted RBP17■□□□□ 0.31
CACNA1A-227ENST00000636549 EIF4EP06730 217 aaKnown RBP17■□□□□ 0.31
CACNA1A-227ENST00000636549 PGCP20142 388 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 COL28A1Q2UY09 1125 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms