RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	BCL2L1	Q07817	233 aa		10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	COL13A1	Q5TAT6	717 aa	Predicted RBP	10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	BCL2L15	Q5TBC7	163 aa		10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	CBLL1	Q75N03	491 aa		10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	NLRC3	Q7RTR2	1065 aa		10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	NKAIN4	Q8IVV8	208 aa		10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	LIX1	Q8N485	282 aa		10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	DNAJC5G	Q8N7S2	189 aa		10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	ARL14EP	Q8N8R7	260 aa	Predicted RBP	10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	IL17RC	Q8NAC3	791 aa		10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	PROKR2	Q8NFJ6	384 aa		10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	DMBX1	Q8NFW5	382 aa		10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	ELP5	Q8TE02	316 aa		10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	SFT2D1	Q8WV19	159 aa		10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	KCNJ9	Q92806	393 aa		10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	RAD51AP1	Q96B01	352 aa		10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	MRPS24	Q96EL2	167 aa	Known RBP	10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	MRPL48	Q96GC5	212 aa	Known RBP	10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	CXorf58	Q96LI9	332 aa		10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	MAPKAP1	Q9BPZ7	522 aa		10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	IL21	Q9HBE4	155 aa		10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	PRDM9	Q9NQV7	894 aa		10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	ASIC5	Q9NY37	505 aa		10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	HCN2	Q9UL51	889 aa		10.21	□□□□□ -0.77
CHD2-223	ENST00000636306	FAM74A7	A6NL05	159 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	STK25	O00506	426 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	CCL22	O00626	93 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	ADAMDEC1	O15204	470 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	CS	O75390	466 aa	Known RBP	10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	APOC3	P02656	99 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	PIRT	P0C851	137 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	RHCE	P18577	417 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	NNMT	P40261	264 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	VEGFC	P49767	419 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	HNMT	P50135	292 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	MNX1	P50219	401 aa	Predicted RBP	10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	CRYZ	Q08257	329 aa	Known RBP	10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	C1D	Q13901	141 aa	Known RBP	10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	IL18	Q14116	193 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	RBBP7	Q16576	425 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	ZNF528	Q3MIS6	628 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	FAM74A3	Q4VXF1	159 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	ZRANB3	Q5FWF4	1079 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	PYHIN1	Q6K0P9	492 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	RNF165	Q6ZSG1	346 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	LDB1	Q86U70	411 aa	Predicted RBP	10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	PAQR7	Q86WK9	346 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	KRT78	Q8N1N4	520 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	FTMT	Q8N4E7	242 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	NANOGP1	Q8N7R0	232 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	ADAMTS14	Q8WXS8	1223 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	LRRC46	Q96FV0	321 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	TCEAL7	Q9BRU2	100 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	C1QTNF6	Q9BXI9	259 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	TMPRSS13	Q9BYE2	586 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	ZNF334	Q9HCZ1	680 aa	Predicted RBP	10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	FZD3	Q9NPG1	666 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	ISYNA1	Q9NPH2	558 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	ZMYM5	Q9UJ78	669 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	PCTP	Q9UKL6	214 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	OR51B4	Q9Y5P0	310 aa		10.21	□□□□□ -0.78
CHD2-223	ENST00000636306	C2orf74	A8MZ97	194 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	GTPBP1	O00178	669 aa	Known RBP	10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	LGALS8	O00214	317 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	RLN2	P04090	185 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	HIST1H2AD	P20671	130 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	ITGB8	P26012	769 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	SERPINA4	P29622	427 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	IDH2	P48735	452 aa	Known RBP	10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	PIK3CG	P48736	1102 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	VLDLR	P98155	873 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	PUM1	Q14671	1186 aa	Known RBP eCLIP	10.2	□□□□□ -0.78	4e-6	■■□□□ 14.4
CHD2-223	ENST00000636306	TEAD4	Q15561	434 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	HIST2H2AA3	Q6FI13	130 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	SLC25A25	Q6KCM7	469 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	TMEM150A	Q86TG1	271 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	SERPINA11	Q86U17	422 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	PIM3	Q86V86	326 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	PDZD9	Q8IXQ8	264 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	RYBP	Q8N488	228 aa	Predicted RBP	10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	C12orf45	Q8N5I9	185 aa	Predicted RBP	10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	MDGA1	Q8NFP4	955 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	PHOSPHO2	Q8TCD6	241 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	USP7	Q93009	1102 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	HIST1H2AH	Q96KK5	128 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	FCRL1	Q96LA6	429 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	UBL7	Q96S82	380 aa	Predicted RBP	10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	HIST1H2AJ	Q99878	128 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	YIPF4	Q9BSR8	244 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	DPY30	Q9C005	99 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	ACTR6	Q9GZN1	396 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	SLC25A19	Q9HC21	320 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	TAS2R16	Q9NYV7	291 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	CFAP97	Q9P2B7	532 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	MYEF2	Q9P2K5	600 aa	Known RBP	10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	FKBPL	Q9UIM3	349 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	ERVK-19	Q9WJR5	959 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	PADI2	Q9Y2J8	665 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	GSTK1	Q9Y2Q3	226 aa		10.2	□□□□□ -0.78

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