RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 SEMA6DQ8NFY4 1073 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 MRAP2Q96G30 205 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 TBX5Q99593 518 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 DPCDQ9BVM2 203 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 TTYH3Q9C0H2 523 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 TMPRSS5Q9H3S3 457 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 ISYNA1Q9NPH2 558 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 CLEC4EQ9ULY5 219 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 IGSF1Q8N6C5 1336 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 TRAPPC13A5PLN9 417 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 CD300LBA8K4G0 201 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 ZNF99A8MXY4 864 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 F8VP50 259 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 MAGEB4O15481 346 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 LDB2O43679 373 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 ADAM11O75078 769 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 ESR1P03372 595 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 PROS1P07225 676 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 OR10J4P0C629 311 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 TACR3P29371 465 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 EPHA5P54756 1037 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 NFATC2Q13469 925 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 PAGE3Q5JUK9 113 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 C16orf46Q6P387 395 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 ZNF836Q6ZNA1 936 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 CYP4V2Q6ZWL3 525 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 PLXDC1Q8IUK5 500 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 OR1J2Q8NGS2 313 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 OR2A12Q8NGT7 310 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 BBS10Q8TAM1 723 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 FOXJ1Q92949 421 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 RELTQ969Z4 430 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 APH1AQ96BI3 265 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 FBXL12Q9NXK8 326 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 PCDHA9Q9Y5H5 950 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 ERVK-7P63135 1459 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 AQP12BA6NM10 295 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 BTNL10A8MVZ5 291 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 UBE2Q2LH0YL09 131 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 RDH16O75452 317 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 ADRB3P13945 408 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 IMPDH1P20839 514 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 SLC35A2P78381 396 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 CNN3Q15417 329 aaKnown RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 RABL3Q5HYI8 236 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 PRAMEF14Q5SWL7 426 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 PRAMEF13Q5VWM6 474 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 RPL7L1Q6DKI1 246 aaKnown RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 ZNF425Q6IV72 752 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 PNCKQ6P2M8 343 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 GPR155Q7Z3F1 870 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 PRR18Q8N4B5 295 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 NUP37Q8NFH4 326 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 BPIFCQ8NFQ6 507 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 FAM46BQ96A09 425 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 BOD1Q96IK1 185 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 EBPLQ9BY08 206 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 RPS10P5Q9NQ39 176 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 OR2S2Q9NQN1 319 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 ABCB8Q9NUT2 735 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 MKS1Q9NXB0 559 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 LUZP4Q9P127 313 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 PUS1Q9Y606 427 aaKnown RBP eCLIP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 KIF1AQ12756 1690 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 CNTNAP4Q9C0A0 1308 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 BPGMP07738 259 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 YBEYP58557 167 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 FPGSQ05932 587 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 SMAGPQ0VAQ4 97 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 TAF1AQ15573 450 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 ANKDD1AQ495B1 522 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 SFRP5Q5T4F7 317 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 MEDAGQ5VYS4 303 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 TMPRSS11FQ6ZWK6 438 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 ZSWIM9Q86XI8 627 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 SIDT2Q8NBJ9 832 aaKnown RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 THAP4Q8WY91 577 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 OR5P2Q8WZ92 322 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 ELMOD3Q96FG2 381 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 WACQ9BTA9 647 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 ZDHHC5Q9C0B5 715 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 MAGEH1Q9H213 219 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 GSTO2Q9H4Y5 243 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 HRASLSQ9HDD0 168 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 FBXO5Q9UKT4 447 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 EXOSC1Q9Y3B2 195 aaKnown RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 PTPRTO14522 1441 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 GSG1L2A8MUP6 293 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 TLR4O00206 839 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 CXCR6O00574 342 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 SCAMP3O14828 347 aaKnown RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 SURF4O15260 269 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 PTBP3O95758 552 aaKnown RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 POU2F1P14859 743 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 HLA-FP30511 346 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 ICAM3P32942 547 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 PIN1Q13526 163 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 MEP1BQ16820 701 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 FAM69AQ5T7M9 428 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 TRMT10BQ6PF06 316 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms