RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	TUBB3	Q13509	450 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ZNF846	Q147U1	533 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	KIR2DS5	Q14953	304 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	MANEAL	Q5VSG8	457 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	GRHL2	Q6ISB3	625 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	RNF111	Q6ZNA4	994 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ACOT4	Q8N9L9	421 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	OR5D16	Q8NGK9	328 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	OR52P1P	Q8NH57	321 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	THEM6	Q8WUY1	208 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	COQ8B	Q96D53	544 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	IL21	Q9HBE4	155 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	MARK1	Q9P0L2	795 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	RPL36	Q9Y3U8	105 aa	Known RBP	13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	NPIPA5	A0A0B4J1W7	369 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	C2orf92	A0A1B0GVN3	265 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	NPIPA7	E9PJI5	369 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	REN	P00797	406 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	MRPL3	P09001	348 aa	Known RBP	13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	NPIPA8	P0DM63	369 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	MC3R	P41968	323 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	GDI2	P50395	445 aa	Known RBP	13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	HOXC5	Q00444	222 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	TIGD6	Q17RP2	521 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	RAB11FIP2	Q7L804	512 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	DAZL	Q92904	295 aa	Known RBP	13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ULBP3	Q9BZM4	244 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	CKLF	Q9UBR5	152 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ANTXRL	A6NF34	631 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	PRR33	A8MZF0	331 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	KHDRBS3	O75525	346 aa	Known RBP	13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ARHGEF15	O94989	841 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	RLN1	P04808	185 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	F3	P13726	295 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	HOXC12	P31275	282 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	OR1D4	P47884	311 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	SLC3A1	Q07837	685 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	MEX3D	Q86XN8	651 aa	Known RBP	13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	MKRN2	Q9H000	416 aa	Known RBP	13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	TNFRSF10D	Q9UBN6	386 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	POFUT2	Q9Y2G5	429 aa		13.58	□□□□□ -0.24
NEDD4L-238	ENST00000635997	POM121B	A6NF01	834 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	TMEM202	A6NGA9	273 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997		J3QLW9	94 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	SCAMP2	O15127	329 aa	Known RBP	13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	B3GALT4	O96024	378 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ZNF19	P17023	458 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ATP4B	P51164	291 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	OR12D2	P58182	307 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	TXNL4A	P83876	142 aa	Known RBP	13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	TCTN1	Q2MV58	587 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	TYSND1	Q2T9J0	566 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ATG9B	Q674R7	924 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	TSPEAR	Q8WU66	669 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	LPAR4	Q99677	370 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	MPZL2	O60487	215 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	MMP12	P39900	470 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	FOLR3	P41439	243 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ALDH3A2	P51648	485 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	TAS2R38	P59533	333 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	SLC36A3	Q495N2	470 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	OR8J3	Q8NGG0	315 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	OR9A2	Q8NGT5	310 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	TRIM63	Q969Q1	353 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	TMIGD2	Q96BF3	282 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ALOXE3	Q9BYJ1	711 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	KAT8	Q9H7Z6	458 aa	Known RBP	13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	TM9SF3	Q9HD45	589 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	TAAR2	Q9P1P5	351 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	PTRH2	Q9Y3E5	179 aa	Known RBP	13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	CACNA1I	Q9P0X4	2223 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ATRX	P46100	2492 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	METTL12	A8MUP2	240 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	HTRA2	O43464	458 aa	Predicted RBP	13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	CHST10	O43529	356 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	RCBTB2	O95199	551 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	PRLHR	P49683	370 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	SMS	P52788	366 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	SLC30A8	Q8IWU4	369 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	OR51G2	Q8NGK0	314 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	DOHH	Q9BU89	302 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	PRODH2	Q9UF12	536 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	SCN1A	P35498	2009 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	CDC14C	A4D256	554 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	FGF4	P08620	206 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	CD97	P48960	835 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	TRAM2	Q15035	370 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	PON3	Q15166	354 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	TMEM35A	Q53FP2	167 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	C10orf62	Q5T681	223 aa	Predicted RBP	13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	TMEM225	Q6GV28	225 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	OLIG1	Q8TAK6	271 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	KLHL6	Q8WZ60	621 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	UBXN10	Q96LJ8	280 aa		13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ADAD1	Q96M93	576 aa	Known RBP	13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	WDR83	Q9BRX9	315 aa	Known RBP	13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	MBNL1	Q9NR56	388 aa	Known RBP	13.57	□□□□□ -0.24
NEDD4L-238	ENST00000635997	SPAAR	A0A1B0GVQ0	90 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	EED	O75530	441 aa	Known RBP	13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms