RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 CXorf56Q9H5V9 222 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 ENAMQ9NRM1 1142 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 EXD2Q9NVH0 621 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 DNAAF2Q9NVR5 837 aaKnown RBP11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 NDRG4Q9ULP0 352 aaKnown RBP11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 DMDP11532 3685 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 ADAMTS20P59510 1910 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 IGHV5-51A0A0C4DH38 117 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 SMIM31A0A1B0GVY4 71 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 FAM227AF5H4B4 570 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 H3BMH7 237 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 TNFRSF11BO00300 401 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 LDB3O75112 727 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 NME6O75414 186 aaPredicted RBP11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 OR6B1O95007 311 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 BMP10O95393 424 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 PORP16435 677 aaPredicted RBP11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 ELK4P28324 431 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 CTSKP43235 329 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 YAP1P46937 504 aaKnown RBP11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 EPHA4P54764 986 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 GFERP55789 205 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 SHC2P98077 582 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 CD47Q08722 323 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 MGAT2Q10469 447 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 IL18R1Q13478 541 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 RAPSNQ13702 412 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 KEAP1Q14145 624 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 MICAQ29983 383 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 C6orf132Q5T0Z8 1188 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 MFSD12Q6NUT3 480 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 GALNT5Q7Z7M9 940 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 C8orf59Q8N0T1 100 aaPredicted RBP11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 CHDHQ8NE62 594 aaPredicted RBP11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 BBS10Q8TAM1 723 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 RASSF5Q8WWW0 418 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 ANKRD9Q96BM1 317 aaPredicted RBP11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 CTHRC1Q96CG8 243 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 COL21A1Q96P44 957 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 ZNF607Q96SK3 696 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 PITX2Q99697 317 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 GABARAPL3Q9BY60 117 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 ACTRT3Q9BYD9 372 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 PTGFRNQ9P2B2 879 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 TRPC4Q9UBN4 977 aa11.74□□□□□ -0.53
CACNA1A-219ENST00000635917 A0A087WV62 115 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 A0A0G2JPF8 293 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 TLCD2A6NGC4 264 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 HNRNPCL2B2RXH8 293 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 HNRNPCL3B7ZW38 293 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 SGK494L7N484 410 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 PLOD3O60568 738 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 GPR75O95800 540 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 IFNW1P05000 195 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 HNRNPCL4P0DMR1 293 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 NR2F1P10589 423 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 MAP3K8P41279 467 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 ANXA11P50995 505 aaKnown RBP11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 CDH12P55289 794 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 RAB38P57729 211 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 CFHR1Q03591 330 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 BNIP3Q12983 259 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 NR1D2Q14995 579 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 PRICKLE4Q2TBC4 344 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 INAVAQ3KP66 663 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 WDR45BQ5MNZ6 344 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 ZNF770Q6IQ21 691 aaPredicted RBP11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 CDC73Q6P1J9 531 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 TSSK4Q6SA08 328 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 FAM92BQ6ZTR7 304 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 RBM45Q8IUH3 476 aaKnown RBP11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 LACC1Q8IV20 430 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 CCDC71Q8IV32 467 aaPredicted RBP11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 SLC16A11Q8NCK7 471 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 ZNF555Q8NEP9 628 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 OR9A4Q8NGU2 314 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 GIPC3Q8TF64 312 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 TANKQ92844 425 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 SLC35A4Q96G79 324 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 MS4A4EQ96PG1 132 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 FEVQ99581 238 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 CCDC3Q9BQI4 270 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 FUZQ9BT04 418 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 DDX18Q9NVP1 670 aaKnown RBP11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 RLIMQ9NVW2 624 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 C19orf53Q9UNZ5 99 aaPredicted RBP11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 CHST2Q9Y4C5 530 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 CLDN16Q9Y5I7 305 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 CSNK1G3Q9Y6M4 447 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 RNF215Q9Y6U7 377 aa11.73□□□□□ -0.53
CACNA1A-219ENST00000635917 A0A1B0GVT2 93 aa11.72□□□□□ -0.53
CACNA1A-219ENST00000635917 ARRDC5A6NEK1 342 aa11.72□□□□□ -0.53
CACNA1A-219ENST00000635917 PCDH17O14917 1159 aa11.72□□□□□ -0.53
CACNA1A-219ENST00000635917 B4GAT1O43505 415 aa11.72□□□□□ -0.53
CACNA1A-219ENST00000635917 NUDT21O43809 227 aaKnown RBP11.72□□□□□ -0.53
CACNA1A-219ENST00000635917 RDH16O75452 317 aa11.72□□□□□ -0.53
CACNA1A-219ENST00000635917 SERPINB7O75635 380 aa11.72□□□□□ -0.53
CACNA1A-219ENST00000635917 LGI1O95970 557 aa11.72□□□□□ -0.53
CACNA1A-219ENST00000635917 PDGFBP01127 241 aaPredicted RBP11.72□□□□□ -0.53
CACNA1A-219ENST00000635917 CRHBPP24387 322 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms