RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 BICD1Q96G01 975 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 PCED1BQ96HM7 432 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 CBWD1Q9BRT8 395 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 SLC2A11Q9BYW1 496 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 RAB34Q9BZG1 259 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 TRIM9Q9C026 710 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 MTMR12Q9C0I1 747 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 SLC5A7Q9GZV3 580 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 CSTL1Q9H114 145 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 GAREM1Q9H706 876 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 SRD5A3Q9H8P0 318 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 RPF1Q9H9Y2 349 aaKnown RBP2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 EBF2Q9HAK2 575 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 CSNK1G1Q9HCP0 422 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 TRPC7Q9HCX4 862 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 GSN-AS1Q9NRJ2 163 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 DUS2Q9NX74 493 aaKnown RBP2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 SPHK1Q9NYA1 384 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 UXTQ9UBK9 157 aaPredicted RBP2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 TRPC4Q9UBN4 977 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 MOSPD1Q9UJG1 213 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 WDR83OSQ9Y284 106 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 SLCO1B1Q9Y6L6 691 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 APCP25054 2843 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 SCN8AQ9UQD0 1980 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 ASXL3Q9C0F0 2248 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 LRP4O75096 1905 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 UBE4BO95155 1302 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 C13orf42A0A1B0GVH6 325 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 SPAARA0A1B0GVQ0 90 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 A0A1W2PPI3 338 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 MAGEA13PA6NCF6 341 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 ASPDHA6ND91 283 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 HNRNPCL2B2RXH8 293 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 HHLA1C9JL84 531 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 E9PI62 339 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 F8VP50 259 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 PLOD2O00469 737 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 COCHO43405 550 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 SYNGR3O43761 229 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 ZBTB14O43829 449 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 PRAF2O60831 178 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 RHOBTB1O94844 696 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 TRIM16O95361 564 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 KLF8O95600 359 aaPredicted RBP2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 SP1P08047 785 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 ANKRD34CP0C6C1 535 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 CISD3P0C7P0 127 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 C8orf89P0DMQ9 161 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 CDH1P12830 882 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 VCLP18206 1134 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 EPORP19235 508 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 LMO2P25791 158 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 MARCKSP29966 332 aaPredicted RBP2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 TNFRSF4P43489 277 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 IER3P46695 156 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 THOP1P52888 689 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 PDX1P52945 283 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 ADARP55265 1226 aaKnown RBP2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 BPIFB3P59826 476 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 RPL10AP62906 217 aaKnown RBP2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 RPL24P83731 157 aaKnown RBP2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 CYP24A1Q07973 514 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 ZNF415Q09FC8 603 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 INCA1Q0VD86 236 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 GAGE5Q13069 117 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 GAGE6Q13070 117 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 ZBTB17Q13105 803 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 CBX3Q13185 183 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 KIR2DS3Q14952 304 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 SGCBQ16585 318 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 IQCCQ4KMZ1 466 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 AARDQ4LEZ3 155 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 CEP85LQ5SZL2 805 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 C1orf220Q5T0J3 134 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.25□□□□□ -2.056e-15■□□□□ 9.2
SMARCB1-208ENST00000634926 BSPRYQ5W0U4 402 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 LYSMD4Q5XG99 296 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 ARMCX5Q6P1M9 558 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 CNSTQ6PJW8 725 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 BTNL8Q6UX41 500 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 C16orf82Q7Z2V1 217 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 PIWIL4Q7Z3Z4 852 aaKnown RBP2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 RABEPKQ7Z6M1 372 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 AMIGO1Q86WK6 493 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 CBWD2Q8IUF1 395 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 WDR49Q8IV35 697 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 NAXDQ8IW45 347 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 CNTN4Q8IWV2 1026 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 BBS7Q8IWZ6 715 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 CFAP206Q8IYR0 622 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 ZNF619Q8N2I2 560 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 ZNF441Q8N8Z8 693 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 OR4K1Q8NGD4 311 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 CCDC26Q8TAB7 109 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 UBLCP1Q8WVY7 318 aaPredicted RBP2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 MRPS31Q92665 395 aaKnown RBP2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 FAM131CQ96AQ9 280 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 OTUB2Q96DC9 234 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 LINGO1Q96FE5 620 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms