RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 MARK4Q96L34 752 aa17.97■□□□□ 0.47
CROCCP4-202ENST00000633627 SIKE1Q9BRV8 207 aa17.97■□□□□ 0.47
CROCCP4-202ENST00000633627 DUSP26Q9BV47 211 aa17.97■□□□□ 0.47
CROCCP4-202ENST00000633627 CLMPQ9H6B4 373 aa17.97■□□□□ 0.47
CROCCP4-202ENST00000633627 TRIM45Q9H8W5 580 aaPredicted RBP17.97■□□□□ 0.47
CROCCP4-202ENST00000633627 NPHS2Q9NP85 383 aa17.97■□□□□ 0.47
CROCCP4-202ENST00000633627 SDR39U1Q9NRG7 319 aaPredicted RBP17.97■□□□□ 0.47
CROCCP4-202ENST00000633627 ABI3Q9P2A4 366 aa17.97■□□□□ 0.47
CROCCP4-202ENST00000633627 BCAP29Q9UHQ4 241 aa17.97■□□□□ 0.47
CROCCP4-202ENST00000633627 DCTN4Q9UJW0 460 aa17.97■□□□□ 0.47
CROCCP4-202ENST00000633627 C19orf53Q9UNZ5 99 aaPredicted RBP17.97■□□□□ 0.47
CROCCP4-202ENST00000633627 DTX4Q9Y2E6 619 aa17.97■□□□□ 0.47
CROCCP4-202ENST00000633627 A0A1W2PRB8 838 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 WWP2O00308 870 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 FCHO1O14526 889 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 PRAMEF2O60811 474 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 SCN2BO60939 215 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 C1QL1O75973 258 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 OR2J2O76002 312 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 PSMG1O95456 288 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 NADKO95544 446 aaPredicted RBP17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 F10P00742 488 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 PRB1P04280 392 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 VIMP08670 466 aaKnown RBP17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 EFNA1P20827 205 aaPredicted RBP17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 GPX3P22352 226 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 IL12AP29459 219 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 MC3RP41968 323 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 MRPL19P49406 292 aaKnown RBP17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 TNFSF10P50591 281 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 NME5P56597 212 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 PHC1P78364 1004 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 ARG2P78540 354 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 SRSF11Q05519 484 aaKnown RBP17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 TUBA3CQ13748 450 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 NADK2Q4G0N4 442 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 PIGGQ5H8A4 983 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 SLC6A19Q695T7 634 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 TUBA3EQ6PEY2 450 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 TMEM107Q6UX40 140 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 OR2L13Q8N349 312 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 TEX19Q8NA77 164 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 PSMA8Q8TAA3 256 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 OR5P2Q8WZ92 322 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 TP53INP1Q96A56 240 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 RASL10BQ96S79 203 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 MFRPQ9BY79 579 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 NTMQ9P121 344 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 CFL2Q9Y281 166 aa17.96■□□□□ 0.47
CROCCP4-202ENST00000633627 C2orf92A0A1B0GVN3 265 aa17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 E9PBE3 544 aa17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 UPK1AO00322 258 aa17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 HLCSP50747 726 aa17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 CDK9P50750 372 aaKnown RBP17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 SSR4P51571 173 aa17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 HSPB3Q12988 150 aa17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 RPS6KA2Q15349 733 aa17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 DPY19L1Q2PZI1 675 aa17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 PGS1Q32NB8 556 aa17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 PLEKHN1Q494U1 663 aaPredicted RBP17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 SPANXN4Q5MJ08 99 aa17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 OR4F3Q6IEY1 312 aa17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 ZNF227Q86WZ6 799 aa17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 C17orf47Q8NEP4 570 aa17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 PNPLA2Q96AD5 504 aa17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 GAL3ST4Q96RP7 486 aa17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 UTP23Q9BRU9 249 aaKnown RBP17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 SIRT3Q9NTG7 399 aaPredicted RBP17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 FAM53CQ9NYF3 392 aa17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 ZIM2Q9NZV7 527 aa17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 PRODH2Q9UF12 536 aa17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 B3GNT3Q9Y2A9 372 aa17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 HEMK1Q9Y5R4 338 aaPredicted RBP17.95■□□□□ 0.46
CROCCP4-202ENST00000633627 NEURL1O76050 574 aa17.94■□□□□ 0.46
CROCCP4-202ENST00000633627 KIR3DL1P43629 444 aa17.94■□□□□ 0.46
CROCCP4-202ENST00000633627 ZFP36L2P47974 494 aaKnown RBP17.94■□□□□ 0.46
CROCCP4-202ENST00000633627 TLR1Q15399 786 aa17.94■□□□□ 0.46
CROCCP4-202ENST00000633627 LYPD8Q6UX82 237 aa17.94■□□□□ 0.46
CROCCP4-202ENST00000633627 ZNF843Q8N446 348 aa17.94■□□□□ 0.46
CROCCP4-202ENST00000633627 Q8NA96 180 aa17.94■□□□□ 0.46
CROCCP4-202ENST00000633627 GLB1L3Q8NCI6 653 aaPredicted RBP17.94■□□□□ 0.46
CROCCP4-202ENST00000633627 MDS2Q8NDY4 140 aa17.94■□□□□ 0.46
CROCCP4-202ENST00000633627 VSTM2LQ96N03 204 aa17.94■□□□□ 0.46
CROCCP4-202ENST00000633627 SIGLEC12Q96PQ1 595 aa17.94■□□□□ 0.46
CROCCP4-202ENST00000633627 ITPAQ9BY32 194 aa17.94■□□□□ 0.46
CROCCP4-202ENST00000633627 TRIM4Q9C037 500 aa17.94■□□□□ 0.46
CROCCP4-202ENST00000633627 RYDENQ9NUL5 291 aaKnown RBP17.94■□□□□ 0.46
CROCCP4-202ENST00000633627 ANKRD10Q9NXR5 420 aa17.94■□□□□ 0.46
CROCCP4-202ENST00000633627 ANAPC2Q9UJX6 822 aa17.94■□□□□ 0.46
CROCCP4-202ENST00000633627 ERVK-11Q9UQG0 969 aa17.94■□□□□ 0.46
CROCCP4-202ENST00000633627 TRAV17A0A0B4J275 112 aa17.93■□□□□ 0.46
CROCCP4-202ENST00000633627 A0A0G2JND7 137 aa17.93■□□□□ 0.46
CROCCP4-202ENST00000633627 C9JVG2 144 aa17.93■□□□□ 0.46
CROCCP4-202ENST00000633627 RNASET2O00584 256 aaKnown RBP17.93■□□□□ 0.46
CROCCP4-202ENST00000633627 NME6O75414 186 aaPredicted RBP17.93■□□□□ 0.46
CROCCP4-202ENST00000633627 SLC22A3O75751 556 aa17.93■□□□□ 0.46
CROCCP4-202ENST00000633627 C6orf47O95873 294 aa17.93■□□□□ 0.46
CROCCP4-202ENST00000633627 TROVE2P10155 538 aaKnown RBP eCLIP17.93■□□□□ 0.46
CROCCP4-202ENST00000633627 SOX3P41225 446 aa17.93■□□□□ 0.46
CROCCP4-202ENST00000633627 PPICP45877 212 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms