RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 ERVK-11Q9UQG0 969 aa17.34■□□□□ 0.37
PNKP-224ENST00000631020 CNTRLQ7Z7A1 2325 aa17.34■□□□□ 0.37
PNKP-224ENST00000631020 S1PR1P21453 382 aa17.33■□□□□ 0.37
PNKP-224ENST00000631020 NCBP2P52298 156 aaKnown RBP eCLIP17.33■□□□□ 0.37
PNKP-224ENST00000631020 POLR2JP52435 117 aaKnown RBP17.33■□□□□ 0.37
PNKP-224ENST00000631020 IRX1P78414 480 aaPredicted RBP17.33■□□□□ 0.37
PNKP-224ENST00000631020 ESPL1Q14674 2120 aa17.33■□□□□ 0.37
PNKP-224ENST00000631020 PLEKHN1Q494U1 663 aaPredicted RBP17.33■□□□□ 0.37
PNKP-224ENST00000631020 GLB1L3Q8NCI6 653 aaPredicted RBP17.33■□□□□ 0.37
PNKP-224ENST00000631020 SIMC1Q8NDZ2 872 aa17.33■□□□□ 0.37
PNKP-224ENST00000631020 CTHRC1Q96CG8 243 aa17.33■□□□□ 0.37
PNKP-224ENST00000631020 SENP5Q96HI0 755 aaPredicted RBP17.33■□□□□ 0.37
PNKP-224ENST00000631020 NMUR2Q9GZQ4 415 aa17.33■□□□□ 0.37
PNKP-224ENST00000631020 ACSS1Q9NUB1 689 aaPredicted RBP17.33■□□□□ 0.37
PNKP-224ENST00000631020 ATAD3AQ9NVI7 634 aa17.33■□□□□ 0.37
PNKP-224ENST00000631020 MAT2BQ9NZL9 334 aa17.33■□□□□ 0.37
PNKP-224ENST00000631020 CCDC167Q9P0B6 97 aa17.33■□□□□ 0.37
PNKP-224ENST00000631020 USP9YO00507 2555 aaPredicted RBP17.32■□□□□ 0.36
PNKP-224ENST00000631020 FAM234BA2RU67 622 aa17.32■□□□□ 0.36
PNKP-224ENST00000631020 NTSP30990 170 aa17.32■□□□□ 0.36
PNKP-224ENST00000631020 S100A3P33764 101 aa17.32■□□□□ 0.36
PNKP-224ENST00000631020 KIR3DL1P43629 444 aa17.32■□□□□ 0.36
PNKP-224ENST00000631020 MRPS35P82673 323 aaKnown RBP17.32■□□□□ 0.36
PNKP-224ENST00000631020 MAP4K2Q12851 820 aa17.32■□□□□ 0.36
PNKP-224ENST00000631020 ZNF267Q14586 743 aaPredicted RBP17.32■□□□□ 0.36
PNKP-224ENST00000631020 SPRED3Q2MJR0 410 aa17.32■□□□□ 0.36
PNKP-224ENST00000631020 AGKQ53H12 422 aa17.32■□□□□ 0.36
PNKP-224ENST00000631020 TRMT12Q53H54 448 aaKnown RBP17.32■□□□□ 0.36
PNKP-224ENST00000631020 ZNF628Q5EBL2 1059 aa17.32■□□□□ 0.36
PNKP-224ENST00000631020 PLAG1Q6DJT9 500 aa17.32■□□□□ 0.36
PNKP-224ENST00000631020 BLOC1S3Q6QNY0 202 aa17.32■□□□□ 0.36
PNKP-224ENST00000631020 APCDD1LQ8NCL9 501 aa17.32■□□□□ 0.36
PNKP-224ENST00000631020 MORN4Q8NDC4 146 aa17.32■□□□□ 0.36
PNKP-224ENST00000631020 B3GNT7Q8NFL0 401 aa17.32■□□□□ 0.36
PNKP-224ENST00000631020 OR14A16Q8NHC5 309 aa17.32■□□□□ 0.36
PNKP-224ENST00000631020 SLC2A12Q8TD20 617 aa17.32■□□□□ 0.36
PNKP-224ENST00000631020 ZNF721Q8TF20 911 aa17.32■□□□□ 0.36
PNKP-224ENST00000631020 KAT2AQ92830 837 aa17.32■□□□□ 0.36
PNKP-224ENST00000631020 DAZLQ92904 295 aaKnown RBP17.32■□□□□ 0.36
PNKP-224ENST00000631020 ZBED6CLQ96FA7 236 aaPredicted RBP17.32■□□□□ 0.36
PNKP-224ENST00000631020 ZBTB18Q99592 522 aa17.32■□□□□ 0.36
PNKP-224ENST00000631020 ANKRA2Q9H9E1 313 aa17.32■□□□□ 0.36
PNKP-224ENST00000631020 SLC52A3Q9NQ40 469 aa17.32■□□□□ 0.36
PNKP-224ENST00000631020 ZNF639Q9UID6 485 aa17.32■□□□□ 0.36
PNKP-224ENST00000631020 A0A1W2PRB8 838 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 IGKV3-11P04433 115 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 PGRP06401 933 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 MANFP55145 182 aaKnown RBP17.31■□□□□ 0.36
PNKP-224ENST00000631020 SRSF1Q07955 248 aaKnown RBP eCLIP17.31■□□□□ 0.36
PNKP-224ENST00000631020 DPY19L1Q2PZI1 675 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 BTBD16Q32M84 506 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 CRB2Q5IJ48 1285 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 YTHDF3Q7Z739 585 aaKnown RBP17.31■□□□□ 0.36
PNKP-224ENST00000631020 MTDHQ86UE4 582 aaKnown RBP17.31■□□□□ 0.36
PNKP-224ENST00000631020 GALNT12Q8IXK2 581 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 CLECL1Q8IZS7 167 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 ZNF675Q8TD23 568 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 THOC3Q96J01 351 aaKnown RBP17.31■□□□□ 0.36
PNKP-224ENST00000631020 LMF1Q96S06 567 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 OR8D2Q9GZM6 311 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 EPS8L2Q9H6S3 715 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 ZBTB20Q9HC78 741 aaPredicted RBP17.31■□□□□ 0.36
PNKP-224ENST00000631020 ZNF223Q9UK11 482 aaPredicted RBP17.31■□□□□ 0.36
PNKP-224ENST00000631020 NUP214P35658 2090 aaPredicted RBP17.31■□□□□ 0.36
PNKP-224ENST00000631020 FCHO1O14526 889 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 C6orf47O95873 294 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 CLPSP04118 112 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 IL6P05231 212 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 DDX5P17844 614 aaKnown RBP17.31■□□□□ 0.36
PNKP-224ENST00000631020 SSTR4P31391 388 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 AP2B1P63010 937 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 FUT7Q11130 342 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 HSPB3Q12988 150 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 DUSP8Q13202 625 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 MLC1Q15049 377 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 EXT1Q16394 746 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 FHL5Q5TD97 284 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 ANKRD46Q86W74 232 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 KBTBD2Q8IY47 623 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 KIF2BQ8N4N8 673 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 NATD1Q8N6N6 113 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 OR7G2Q8NG99 324 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 OR1N1Q8NGS0 311 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 M1APQ8TC57 530 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 NCLNQ969V3 563 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 VPS33AQ96AX1 596 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 SNRNP40Q96DI7 357 aaKnown RBP17.31■□□□□ 0.36
PNKP-224ENST00000631020 FBXL20Q96IG2 436 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 OR52E6Q96RD3 313 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 BARD1Q99728 777 aaKnown RBP17.31■□□□□ 0.36
PNKP-224ENST00000631020 CNPPD1Q9BV87 410 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 TMEM45AQ9NWC5 275 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 LUZP4Q9P127 313 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 ERVK-19Q9WJR5 959 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 ARL2BPQ9Y2Y0 163 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 PCDHGA10Q9Y5H3 936 aa17.31■□□□□ 0.36
PNKP-224ENST00000631020 PRSS51A0A1B0GVH4 220 aa17.3■□□□□ 0.36
PNKP-224ENST00000631020 RNASET2O00584 256 aaKnown RBP17.3■□□□□ 0.36
PNKP-224ENST00000631020 GNLYP22749 145 aa17.3■□□□□ 0.36
PNKP-224ENST00000631020 UQCRFS1P47985 274 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms