RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 RIDAP52758 137 aaKnown RBP12.19□□□□□ -0.46
SCN8A-209ENST00000627620 GSCP56915 257 aaPredicted RBP12.19□□□□□ -0.46
SCN8A-209ENST00000627620 GRHL2Q6ISB3 625 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 DTX3Q8N9I9 347 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 OR52E2Q8NGJ4 325 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 OR13C3Q8NGS6 347 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 MAL2Q969L2 176 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 RTP4Q96DX8 246 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 URM1Q9BTM9 101 aaKnown RBP12.19□□□□□ -0.46
SCN8A-209ENST00000627620 FBRSQ9HAH7 460 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 PDLIM7Q9NR12 457 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 KLHL21Q9UJP4 597 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 KCNS2Q9ULS6 477 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 SIGLEC1Q9BZZ2 1709 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 I3L521 148 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 EIF3FO00303 357 aaPredicted RBP12.19□□□□□ -0.46
SCN8A-209ENST00000627620 ZNF217O75362 1048 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 DNAJB5O75953 348 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 S100A2P29034 98 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 GGT2P36268 569 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 LRRN1Q6UXK5 716 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 LARP4Q71RC2 724 aaKnown RBP eCLIP12.19□□□□□ -0.46
SCN8A-209ENST00000627620 ZER1Q7Z7L7 766 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 SCD5Q86SK9 330 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 STOML3Q8TAV4 291 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 CREB3L4Q8TEY5 395 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 DIO2Q92813 273 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 FOXJ1Q92949 421 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 FAM46AQ96IP4 442 aaKnown RBP12.19□□□□□ -0.46
SCN8A-209ENST00000627620 FEVQ99581 238 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 KATNBL1Q9H079 304 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 HHATLQ9HCP6 504 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 SOBPA7XYQ1 873 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 NARSO43776 548 aaKnown RBP12.19□□□□□ -0.46
SCN8A-209ENST00000627620 KIAA0513O60268 411 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 SNNO75324 88 aaPredicted RBP12.19□□□□□ -0.46
SCN8A-209ENST00000627620 PLATP00750 562 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 GKN3PP0CG01 181 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 RPS15P62841 145 aaKnown RBP12.19□□□□□ -0.46
SCN8A-209ENST00000627620 DLX2Q07687 328 aaPredicted RBP12.19□□□□□ -0.46
SCN8A-209ENST00000627620 DEFB110Q30KQ9 67 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 LRRC37A5PQ49AS3 106 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 ALG10BQ5I7T1 473 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 C17orf99Q6UX52 265 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 PIAS4Q8N2W9 510 aaPredicted RBP12.19□□□□□ -0.46
SCN8A-209ENST00000627620 ACBD7Q8N6N7 88 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 MTG2Q9H4K7 406 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 PELI2Q9HAT8 420 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 C14orf119Q9NWQ9 140 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 ANKMY1Q9P2S6 941 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 DLG5Q8TDM6 1919 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 SEC14L5O43304 696 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 ATP6V1G1O75348 118 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 FAM180BQ6P0A1 224 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 TCEAL8Q8IYN2 117 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 PRR11Q96HE9 360 aaPredicted RBP12.19□□□□□ -0.46
SCN8A-209ENST00000627620 PHRF1Q9P1Y6 1649 aaKnown RBP12.19□□□□□ -0.46
SCN8A-209ENST00000627620 NPIPB15A6NHN6 443 aaPredicted RBP12.19□□□□□ -0.46
SCN8A-209ENST00000627620 CLCA1A8K7I4 914 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 A8MV72 311 aaPredicted RBP12.19□□□□□ -0.46
SCN8A-209ENST00000627620 RGS9O75916 674 aaPredicted RBP12.19□□□□□ -0.46
SCN8A-209ENST00000627620 SFTPBP07988 381 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 RPS3P23396 243 aaKnown RBP eCLIP12.19□□□□□ -0.46
SCN8A-209ENST00000627620 IVDP26440 423 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 ZXDBP98169 803 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 RPA4Q13156 261 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 TCTE1Q5JU00 501 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 NELL2Q99435 816 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 M0R129 80 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 CNMDO75829 334 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 ZNF423Q2M1K9 1284 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 Q8N402 240 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 MARVELD2Q8N4S9 558 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 ZNF709Q8N972 641 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 GOLM1Q8NBJ4 401 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 OR5AR1Q8NGP9 310 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 LGALS12Q96DT0 336 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 STRA6Q9BX79 667 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 ACTRT3Q9BYD9 372 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 MTHFD2LQ9H903 347 aaPredicted RBP12.18□□□□□ -0.46
SCN8A-209ENST00000627620 IL26Q9NPH9 171 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 C5AR2Q9P296 337 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 TIMP1P01033 207 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 ERCC1P07992 297 aaPredicted RBP12.18□□□□□ -0.46
SCN8A-209ENST00000627620 LBX1P52954 281 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 MORN1Q5T089 497 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 OR4K13Q8NH42 304 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 KAT6AQ92794 2004 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 BMFQ96LC9 184 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 PITX2Q99697 317 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 ZFYVE21Q9BQ24 234 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 FN3KQ9H479 309 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 POLE4Q9NR33 117 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 RDH8Q9NYR8 311 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 FAM227AF5H4B4 570 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 UQCRC1P31930 480 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 CDNFQ49AH0 187 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 LCN8Q6JVE9 175 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 TMEM151AQ8N4L1 468 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms