RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 CCDC71Q8IV32 467 aaPredicted RBP20.72■□□□□ 0.91
PNKP-220ENST00000627232 ERI1Q8IV48 349 aaKnown RBP20.72■□□□□ 0.91
PNKP-220ENST00000627232 CAMKK1Q8N5S9 505 aa20.72■□□□□ 0.91
PNKP-220ENST00000627232 ISOC1Q96CN7 298 aa20.72■□□□□ 0.91
PNKP-220ENST00000627232 MPP4Q96JB8 637 aa20.72■□□□□ 0.91
PNKP-220ENST00000627232 DOK1Q99704 481 aa20.72■□□□□ 0.91
PNKP-220ENST00000627232 NIPSNAP1Q9BPW8 284 aa20.72■□□□□ 0.91
PNKP-220ENST00000627232 CCDC3Q9BQI4 270 aa20.72■□□□□ 0.91
PNKP-220ENST00000627232 NMNAT1Q9HAN9 279 aaPredicted RBP20.72■□□□□ 0.91
PNKP-220ENST00000627232 IL21RQ9HBE5 538 aa20.72■□□□□ 0.91
PNKP-220ENST00000627232 TMEM9Q9P0T7 183 aa20.72■□□□□ 0.91
PNKP-220ENST00000627232 PCDHGB1Q9Y5G3 927 aa20.72■□□□□ 0.91
PNKP-220ENST00000627232 CEP192Q8TEP8 1941 aa20.71■□□□□ 0.91
PNKP-220ENST00000627232 LILRA5A6NI73 299 aa20.71■□□□□ 0.91
PNKP-220ENST00000627232 SYT5O00445 386 aa20.71■□□□□ 0.91
PNKP-220ENST00000627232 FAAHO00519 579 aa20.71■□□□□ 0.91
PNKP-220ENST00000627232 UBXN7O94888 489 aa20.71■□□□□ 0.91
PNKP-220ENST00000627232 SLITRK5O94991 958 aa20.71■□□□□ 0.91
PNKP-220ENST00000627232 H1F0P07305 194 aaKnown RBP20.71■□□□□ 0.91
PNKP-220ENST00000627232 IL9P15248 144 aa20.71■□□□□ 0.91
PNKP-220ENST00000627232 PORP16435 677 aaPredicted RBP20.71■□□□□ 0.91
PNKP-220ENST00000627232 TYRP1P17643 537 aa20.71■□□□□ 0.91
PNKP-220ENST00000627232 FMO3P31513 532 aa20.71■□□□□ 0.91
PNKP-220ENST00000627232 MAZP56270 477 aaKnown RBP20.71■□□□□ 0.91
PNKP-220ENST00000627232 VSX2P58304 361 aaPredicted RBP20.71■□□□□ 0.91
PNKP-220ENST00000627232 ROR2Q01974 943 aaKnown RBP20.71■□□□□ 0.91
PNKP-220ENST00000627232 TEKQ02763 1124 aa20.71■□□□□ 0.91
PNKP-220ENST00000627232 ZNF770Q6IQ21 691 aaPredicted RBP20.71■□□□□ 0.91
PNKP-220ENST00000627232 GPR153Q6NV75 609 aa20.71■□□□□ 0.91
PNKP-220ENST00000627232 OR2L13Q8N349 312 aa20.71■□□□□ 0.91
PNKP-220ENST00000627232 SDR16C5Q8N3Y7 309 aa20.71■□□□□ 0.91
PNKP-220ENST00000627232 ARL14Q8N4G2 192 aa20.71■□□□□ 0.91
PNKP-220ENST00000627232 SPEM1Q8N4L4 309 aa20.71■□□□□ 0.91
PNKP-220ENST00000627232 C19orf47Q8N9M1 422 aaKnown RBP20.71■□□□□ 0.91
PNKP-220ENST00000627232 OR7G2Q8NG99 324 aa20.71■□□□□ 0.91
PNKP-220ENST00000627232 OR9Q2Q8NGE9 314 aa20.71■□□□□ 0.91
PNKP-220ENST00000627232 OR4D11Q8NGI4 311 aa20.71■□□□□ 0.91
PNKP-220ENST00000627232 TANKQ92844 425 aa20.71■□□□□ 0.91
PNKP-220ENST00000627232 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.71■□□□□ 0.91
PNKP-220ENST00000627232 CCNB1IP1Q9NPC3 277 aa20.71■□□□□ 0.91
PNKP-220ENST00000627232 KCNE3Q9Y6H6 103 aa20.71■□□□□ 0.91
PNKP-220ENST00000627232 DSPPQ9NZW4 1301 aa20.71■□□□□ 0.91
PNKP-220ENST00000627232 DNAJB6O75190 326 aa20.7■□□□□ 0.9
PNKP-220ENST00000627232 TRMUO75648 421 aaKnown RBP20.7■□□□□ 0.9
PNKP-220ENST00000627232 ST6GAL1P15907 406 aa20.7■□□□□ 0.9
PNKP-220ENST00000627232 ITIH1P19827 911 aa20.7■□□□□ 0.9
PNKP-220ENST00000627232 CDH3P22223 829 aa20.7■□□□□ 0.9
PNKP-220ENST00000627232 SLC35A2P78381 396 aa20.7■□□□□ 0.9
PNKP-220ENST00000627232 DCST1Q5T197 706 aa20.7■□□□□ 0.9
PNKP-220ENST00000627232 HEPHL1Q6MZM0 1159 aa20.7■□□□□ 0.9
PNKP-220ENST00000627232 MFSD12Q6NUT3 480 aa20.7■□□□□ 0.9
PNKP-220ENST00000627232 DEF8Q6ZN54 512 aa20.7■□□□□ 0.9
PNKP-220ENST00000627232 ENTHD1Q8IYW4 607 aa20.7■□□□□ 0.9
PNKP-220ENST00000627232 CA13Q8N1Q1 262 aa20.7■□□□□ 0.9
PNKP-220ENST00000627232 DEPDC4Q8N2C3 294 aa20.7■□□□□ 0.9
PNKP-220ENST00000627232 DEFB119Q8N690 84 aa20.7■□□□□ 0.9
PNKP-220ENST00000627232 VANGL1Q8TAA9 524 aaPredicted RBP20.7■□□□□ 0.9
PNKP-220ENST00000627232 IPCEF1Q8WWN9 437 aaPredicted RBP20.7■□□□□ 0.9
PNKP-220ENST00000627232 SGCDQ92629 289 aa20.7■□□□□ 0.9
PNKP-220ENST00000627232 PAK1IP1Q9NWT1 392 aaPredicted RBP20.7■□□□□ 0.9
PNKP-220ENST00000627232 RHCGQ9UBD6 479 aa20.7■□□□□ 0.9
PNKP-220ENST00000627232 MGAT4BQ9UQ53 548 aa20.7■□□□□ 0.9
PNKP-220ENST00000627232 NINQ8N4C6 2090 aa20.7■□□□□ 0.9
PNKP-220ENST00000627232 SOX1O00570 391 aaPredicted RBP20.69■□□□□ 0.9
PNKP-220ENST00000627232 CYR61O00622 381 aa20.69■□□□□ 0.9
PNKP-220ENST00000627232 XPNPEP2O43895 674 aa20.69■□□□□ 0.9
PNKP-220ENST00000627232 ADAP00813 363 aa20.69■□□□□ 0.9
PNKP-220ENST00000627232 ELAVL4P26378 380 aaKnown RBP20.69■□□□□ 0.9
PNKP-220ENST00000627232 RAB38P57729 211 aa20.69■□□□□ 0.9
PNKP-220ENST00000627232 OLR1P78380 273 aa20.69■□□□□ 0.9
PNKP-220ENST00000627232 FAM214AQ32MH5 1076 aa20.69■□□□□ 0.9
PNKP-220ENST00000627232 GTF2IRD2BQ6EKJ0 949 aa20.69■□□□□ 0.9
PNKP-220ENST00000627232 ZNF438Q7Z4V0 828 aa20.69■□□□□ 0.9
PNKP-220ENST00000627232 GTF2IRD2Q86UP8 949 aa20.69■□□□□ 0.9
PNKP-220ENST00000627232 AQP11Q8NBQ7 271 aa20.69■□□□□ 0.9
PNKP-220ENST00000627232 LMX1AQ8TE12 382 aa20.69■□□□□ 0.9
PNKP-220ENST00000627232 ADAMTS15Q8TE58 950 aa20.69■□□□□ 0.9
PNKP-220ENST00000627232 NR4A3Q92570 626 aa20.69■□□□□ 0.9
PNKP-220ENST00000627232 MUL1Q969V5 352 aa20.69■□□□□ 0.9
PNKP-220ENST00000627232 OTUB1Q96FW1 271 aaPredicted RBP20.69■□□□□ 0.9
PNKP-220ENST00000627232 FUZQ9BT04 418 aa20.69■□□□□ 0.9
PNKP-220ENST00000627232 SLC38A1Q9H2H9 487 aa20.69■□□□□ 0.9
PNKP-220ENST00000627232 TRIM45Q9H8W5 580 aaPredicted RBP20.69■□□□□ 0.9
PNKP-220ENST00000627232 EQTNQ9NQ60 294 aa20.69■□□□□ 0.9
PNKP-220ENST00000627232 DOLKQ9UPQ8 538 aa20.69■□□□□ 0.9
PNKP-220ENST00000627232 RNF6Q9Y252 685 aa20.69■□□□□ 0.9
PNKP-220ENST00000627232 A0A087WV62 115 aa20.68■□□□□ 0.9
PNKP-220ENST00000627232 ZNF860A6NHJ4 632 aa20.68■□□□□ 0.9
PNKP-220ENST00000627232 PTGES3LE9PB15 166 aa20.68■□□□□ 0.9
PNKP-220ENST00000627232 PCDHGA12O60330 932 aa20.68■□□□□ 0.9
PNKP-220ENST00000627232 SEMA7AO75326 666 aa20.68■□□□□ 0.9
PNKP-220ENST00000627232 WBP4O75554 376 aaKnown RBP20.68■□□□□ 0.9
PNKP-220ENST00000627232 GPR75O95800 540 aa20.68■□□□□ 0.9
PNKP-220ENST00000627232 ATP1B1P05026 303 aa20.68■□□□□ 0.9
PNKP-220ENST00000627232 ALPPP05187 535 aa20.68■□□□□ 0.9
PNKP-220ENST00000627232 CAPZBP47756 277 aa20.68■□□□□ 0.9
PNKP-220ENST00000627232 RPL6Q02878 288 aaKnown RBP20.68■□□□□ 0.9
PNKP-220ENST00000627232 ZNF628Q5EBL2 1059 aa20.68■□□□□ 0.9
PNKP-220ENST00000627232 C6orf132Q5T0Z8 1188 aa20.68■□□□□ 0.9
PNKP-220ENST00000627232 MLIPQ5VWP3 458 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms