RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 GNSP15586 552 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 JUNBP17275 347 aaPredicted RBP15.35■□□□□ 0.05
LDB3-208ENST00000623007 PRKAR1BP31321 381 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 PIGAP37287 484 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 OR1E2P47887 323 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 MAZP56270 477 aaKnown RBP15.35■□□□□ 0.05
LDB3-208ENST00000623007 GPLD1P80108 840 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 SYPL1Q16563 259 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 INAVAQ3KP66 663 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 ZBED5Q49AG3 693 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 HEPHL1Q6MZM0 1159 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 MFSD12Q6NUT3 480 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 TSEN54Q7Z6J9 526 aaKnown RBP15.35■□□□□ 0.05
LDB3-208ENST00000623007 ZNF595Q8IYB9 648 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 CA13Q8N1Q1 262 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 CDRT4Q8N9R6 151 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 CHDHQ8NE62 594 aaPredicted RBP15.35■□□□□ 0.05
LDB3-208ENST00000623007 TOR1AIP2Q8NFQ8 470 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 ZNF420Q8TAQ5 688 aaPredicted RBP15.35■□□□□ 0.05
LDB3-208ENST00000623007 ALPK1Q96QP1 1244 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 PELOQ9BRX2 385 aaKnown RBP15.35■□□□□ 0.05
LDB3-208ENST00000623007 POLR2J2Q9GZM3 115 aaKnown RBP15.35■□□□□ 0.05
LDB3-208ENST00000623007 POLR2J3Q9H1A7 115 aaKnown RBP15.35■□□□□ 0.05
LDB3-208ENST00000623007 ADNPQ9H2P0 1102 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 ANKRD19PQ9H560 264 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 MTHFD2LQ9H903 347 aaPredicted RBP15.35■□□□□ 0.05
LDB3-208ENST00000623007 DUSP22Q9NRW4 184 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 SUSD2Q9UGT4 822 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 ZNF232Q9UNY5 417 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 SNX5Q9Y5X3 404 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 DSPPQ9NZW4 1301 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 SYNDIG1LA6NDD5 238 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 K7ESF4 209 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 CLDN4O14493 209 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 ABCB7O75027 752 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 NSA2O95478 260 aaKnown RBP15.35■□□□□ 0.05
LDB3-208ENST00000623007 ZBTB11O95625 1053 aaPredicted RBP15.35■□□□□ 0.05
LDB3-208ENST00000623007 LGI1O95970 557 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 ALPPP05187 535 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 H1F0P07305 194 aaKnown RBP15.35■□□□□ 0.05
LDB3-208ENST00000623007 SLC35E2P0CK97 266 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 RNH1P13489 461 aaKnown RBP15.35■□□□□ 0.05
LDB3-208ENST00000623007 AVPR1BP47901 424 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 ARRB1P49407 418 aaPredicted RBP15.35■□□□□ 0.05
LDB3-208ENST00000623007 MAN2A2P49641 1150 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 IL5RAQ01344 420 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 IL1RL1Q01638 556 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 MAPK11Q15759 364 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 EIPR1Q53HC9 387 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 ZNF628Q5EBL2 1059 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 DCST1Q5T197 706 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 DHRS4L2Q6PKH6 230 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 OR5D16Q8NGK9 328 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 IPCEF1Q8WWN9 437 aaPredicted RBP15.35■□□□□ 0.05
LDB3-208ENST00000623007 NCSTNQ92542 709 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 UCN3Q969E3 161 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 GUCD1Q96NT3 240 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 FEVQ99581 238 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 PIGUQ9H490 435 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 ARMC7Q9H6L4 198 aa15.35■□□□□ 0.05
LDB3-208ENST00000623007 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.34■□□□□ 0.05
LDB3-208ENST00000623007 A0A1W2PRQ8 180 aa15.34■□□□□ 0.05
LDB3-208ENST00000623007 SLC9B1P1A6NJY1 282 aa15.34■□□□□ 0.05
LDB3-208ENST00000623007 E9PQ18 207 aa15.34■□□□□ 0.05
LDB3-208ENST00000623007 H0YIG0 161 aa15.34■□□□□ 0.05
LDB3-208ENST00000623007 UGT2B17O75795 530 aa15.34■□□□□ 0.05
LDB3-208ENST00000623007 IFNGR2P38484 337 aa15.34■□□□□ 0.05
LDB3-208ENST00000623007 MLLT3P42568 568 aaPredicted RBP15.34■□□□□ 0.05
LDB3-208ENST00000623007 CD47Q08722 323 aa15.34■□□□□ 0.05
LDB3-208ENST00000623007 PPP1R8Q12972 351 aaKnown RBP15.34■□□□□ 0.05
LDB3-208ENST00000623007 DGCR6Q14129 220 aa15.34■□□□□ 0.05
LDB3-208ENST00000623007 PUM1Q14671 1186 aaKnown RBP eCLIP15.34■□□□□ 0.05
LDB3-208ENST00000623007 EXOC3L2Q2M3D2 409 aa15.34■□□□□ 0.05
LDB3-208ENST00000623007 ARHGAP11BQ3KRB8 267 aa15.34■□□□□ 0.05
LDB3-208ENST00000623007 RPS26P11Q5JNZ5 115 aaPredicted RBP15.34■□□□□ 0.05
LDB3-208ENST00000623007 C6orf132Q5T0Z8 1188 aa15.34■□□□□ 0.05
LDB3-208ENST00000623007 FOXB2Q5VYV0 432 aa15.34■□□□□ 0.05
LDB3-208ENST00000623007 ZNF438Q7Z4V0 828 aa15.34■□□□□ 0.05
LDB3-208ENST00000623007 GALNT5Q7Z7M9 940 aa15.34■□□□□ 0.05
LDB3-208ENST00000623007 KMT5CQ86Y97 462 aa15.34■□□□□ 0.05
LDB3-208ENST00000623007 PLXDC1Q8IUK5 500 aa15.34■□□□□ 0.05
LDB3-208ENST00000623007 MVB12AQ96EY5 273 aa15.34■□□□□ 0.05
LDB3-208ENST00000623007 GIMAP5Q96F15 307 aa15.34■□□□□ 0.05
LDB3-208ENST00000623007 AHCYL2Q96HN2 611 aaKnown RBP15.34■□□□□ 0.05
LDB3-208ENST00000623007 SOX17Q9H6I2 414 aaPredicted RBP15.34■□□□□ 0.05
LDB3-208ENST00000623007 PTTG2Q9NZH5 202 aa15.34■□□□□ 0.05
LDB3-208ENST00000623007 TMEM131Q92545 1883 aa15.34■□□□□ 0.05
LDB3-208ENST00000623007 REV3LO60673 3130 aa15.33■□□□□ 0.05
LDB3-208ENST00000623007 A0A1B0GTW7 788 aa15.33■□□□□ 0.04
LDB3-208ENST00000623007 CCDC160A6NGH7 325 aa15.33■□□□□ 0.04
LDB3-208ENST00000623007 CPNE6O95741 557 aa15.33■□□□□ 0.04
LDB3-208ENST00000623007 ANGPTL1O95841 491 aa15.33■□□□□ 0.04
LDB3-208ENST00000623007 THBS1P07996 1170 aa15.33■□□□□ 0.04
LDB3-208ENST00000623007 ALOX5P09917 674 aa15.33■□□□□ 0.04
LDB3-208ENST00000623007 NELFEP18615 380 aaKnown RBP15.33■□□□□ 0.04
LDB3-208ENST00000623007 SIM1P81133 766 aaPredicted RBP15.33■□□□□ 0.04
LDB3-208ENST00000623007 COX10Q12887 443 aa15.33■□□□□ 0.04
LDB3-208ENST00000623007 CDK5R2Q13319 367 aa15.33■□□□□ 0.04
LDB3-208ENST00000623007 GRM7Q14831 915 aa15.33■□□□□ 0.04
LDB3-208ENST00000623007 LARS2Q15031 903 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms