RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 ARFRP1Q13795 201 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 ZNF846Q147U1 533 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 OR5M10Q6IEU7 315 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 RASSF6Q6ZTQ3 369 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 IKBIPQ70UQ0 350 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 ADIPOR2Q86V24 386 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 ZNF100Q8IYN0 542 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 ZNF101Q8IZC7 436 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 NAGSQ8N159 534 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 SLC5A8Q8N695 610 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 CDRT4Q8N9R6 151 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 STON2Q8WXE9 905 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 DGCR14Q96DF8 476 aaKnown RBP8.77□□□□□ -1.01
GGA3-223ENST00000621870 SFXN2Q96NB2 322 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 CTRCQ99895 268 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 CLEC4MQ9H2X3 399 aaPredicted RBP8.77□□□□□ -1.01
GGA3-223ENST00000621870 ASB6Q9NWX5 421 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 COMMD3Q9UBI1 195 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 MALT1Q9UDY8 824 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 INTS1Q8N201 2190 aaKnown RBP8.76□□□□□ -1.01
GGA3-223ENST00000621870 ARID1AO14497 2285 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 A0A1W2PPL8 197 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 SHISA7A6NL88 538 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 TRMUO75648 421 aaKnown RBP8.76□□□□□ -1.01
GGA3-223ENST00000621870 EDNRAP25101 427 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 MAT1AQ00266 395 aaKnown RBP8.76□□□□□ -1.01
GGA3-223ENST00000621870 C3orf38Q5JPI3 329 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 NKAIN2Q5VXU1 208 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 CWF19L1Q69YN2 538 aaKnown RBP8.76□□□□□ -1.01
GGA3-223ENST00000621870 JAGN1Q8N5M9 183 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 MYEOVQ96EZ4 313 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 CCNL2Q96S94 520 aaPredicted RBP8.76□□□□□ -1.01
GGA3-223ENST00000621870 INPP5KQ9BT40 448 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 SOX17Q9H6I2 414 aaPredicted RBP8.76□□□□□ -1.01
GGA3-223ENST00000621870 KAT8Q9H7Z6 458 aaKnown RBP8.76□□□□□ -1.01
GGA3-223ENST00000621870 CD320Q9NPF0 282 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 CUTCQ9NTM9 273 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 IL20RAQ9UHF4 553 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 A0A1B0GUL6 1792 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 NPIPA5A0A0B4J1W7 369 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 NPIPA7E9PJI5 369 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 TOR1BO14657 336 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 SIGLEC6O43699 453 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 SSNA1O43805 119 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 OPN1LWP04000 364 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 FESP07332 822 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 FGF4P08620 206 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 MRPL3P09001 348 aaKnown RBP8.76□□□□□ -1.01
GGA3-223ENST00000621870 NPIPA8P0DM63 369 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 ETV4P43268 484 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 SLC15A1P46059 708 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 GALNT1Q10472 559 aaPredicted RBP8.76□□□□□ -1.01
GGA3-223ENST00000621870 EXOSC7Q15024 291 aaKnown RBP8.76□□□□□ -1.01
GGA3-223ENST00000621870 KANK2Q63ZY3 851 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 TCEAL6Q6IPX3 200 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 TMPPEQ6ZT21 453 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 VRK3Q8IV63 474 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 ALDH16A1Q8IZ83 802 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 KLHL36Q8N4N3 616 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 HORMAD2Q8N7B1 307 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 PDPRQ8NCN5 879 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 OR52N2Q8NGI0 321 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 OSTF1Q92882 214 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 OMA1Q96E52 524 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 MAPKAP1Q9BPZ7 522 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 NPLQ9BXD5 320 aaPredicted RBP8.76□□□□□ -1.01
GGA3-223ENST00000621870 ACTRT3Q9BYD9 372 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 B3GNT4Q9C0J1 378 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 CD93Q9NPY3 652 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 MGAT4BQ9UQ53 548 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 LRP5O75197 1615 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 LOC100130705A0A1B0GUX0 176 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 FAM25EA8MYX2 175 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 SRPX2O60687 465 aaPredicted RBP8.76□□□□□ -1.01
GGA3-223ENST00000621870 WBP4O75554 376 aaKnown RBP8.76□□□□□ -1.01
GGA3-223ENST00000621870 H6PDO95479 791 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 CPNE6O95741 557 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 SPARCP09486 303 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 BMP1P13497 986 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 HK1P19367 917 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 KCNAB2Q13303 367 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 SLC27A4Q6P1M0 643 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 PLET1Q6UQ28 207 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 C7orf57Q8NEG2 295 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 TOR1AIP2Q8NFQ8 470 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 OR5D16Q8NGK9 328 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 OR6C1Q96RD1 312 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 GPN2Q9H9Y4 310 aaPredicted RBP8.76□□□□□ -1.01
GGA3-223ENST00000621870 SLAMF7Q9NQ25 335 aa8.76□□□□□ -1.01
GGA3-223ENST00000621870 SDR39U1Q9NRG7 319 aaPredicted RBP8.76□□□□□ -1.01
GGA3-223ENST00000621870 NUP214P35658 2090 aaPredicted RBP8.75□□□□□ -1.01
GGA3-223ENST00000621870 TIGD6Q17RP2 521 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 SLC36A3Q495N2 470 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 TMEM184AQ6ZMB5 413 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 CNTN4Q8IWV2 1026 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 SPEM1Q8N4L4 309 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 ZNF283Q8N7M2 679 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 FAM86B1Q8N7N1 296 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 IL17RCQ8NAC3 791 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 SETD6Q8TBK2 473 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms