RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 KCNJ15Q99712 375 aa18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 ARHGAP9Q9BRR9 750 aa18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 TRIM45Q9H8W5 580 aaPredicted RBP18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 STARD7Q9NQZ5 370 aa18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 MCUBQ9NWR8 336 aa18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 ING3Q9NXR8 418 aa18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 TRDV1A0A1B0GX56 115 aa18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 SLC28A2O43868 658 aa18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 OR2B3O76000 313 aa18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 TBX6O95947 436 aaPredicted RBP18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 SOD1P00441 154 aa18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 SMSP52788 366 aa18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 RRAS2P62070 204 aaPredicted RBP18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 RIN1Q13671 783 aa18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 IL18Q14116 193 aa18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 UAP1L1Q3KQV9 507 aa18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 ENTPD8Q5MY95 495 aa18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 C1orf94Q6P1W5 598 aa18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 TBC1D19Q8N5T2 526 aa18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 OR5H6Q8NGV6 325 aa18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 TM4SF18Q96CE8 201 aa18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 FNDC11Q9BVV2 318 aa18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 C5AR2Q9P296 337 aa18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 EXOSC1Q9Y3B2 195 aaKnown RBP18.49■□□□□ 0.55
PDLIM3-212ENST00000620787 LEFTY2O00292 366 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 RTCAO00442 366 aaKnown RBP18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 ICMTO60725 284 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 SLC43A1O75387 559 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 NCR1O76036 304 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 ARSBP15848 533 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 PTBP1P26599 531 aaKnown RBP eCLIP18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 HOXD11P31277 338 aaPredicted RBP18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 CNTN1Q12860 1018 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 SPDYE7PQ495Y7 208 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 TYW3Q6IPR3 259 aaKnown RBP18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 SLC36A4Q6YBV0 504 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 CREB3L2Q70SY1 520 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 SHFQ7M4L6 423 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 CFAP206Q8IYR0 622 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 FAM109AQ8N4B1 249 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 AUTS2Q8WXX7 1259 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 SMPDL3AQ92484 453 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 MRPS31Q92665 395 aaKnown RBP18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 SMG9Q9H0W8 520 aaKnown RBP18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 NEUROD4Q9HD90 331 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 DNMT3AQ9Y6K1 912 aaPredicted RBP18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 SHISA3A0PJX4 238 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 IRGMA1A4Y4 181 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 C12orf71A8MTZ7 269 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 TBX19O60806 448 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 LALBAP00709 142 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 PCBP4P57723 403 aaKnown RBP18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 SF3A2Q15428 464 aaKnown RBP18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 ZNF767PQ75MW2 155 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 TRILQ7L0X0 811 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 ARIH2OSQ8N7S6 290 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 SUN5Q8TC36 379 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 SLC9A6Q92581 669 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 UBE2E3Q969T4 207 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 PPP1R16AQ96I34 528 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 QRFPRQ96P65 431 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 EGLN3Q9H6Z9 239 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 GALNT9Q9HCQ5 603 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 GPR52Q9Y2T5 361 aa18.48■□□□□ 0.55
PDLIM3-212ENST00000620787 LOC102723532A0A0G2JNH3 316 aa18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 WASHC1A8K0Z3 465 aa18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 AVPR1BP47901 424 aa18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 MTNR1AP48039 350 aa18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 SLC6A11P48066 632 aa18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 MAPK12P53778 367 aa18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 MINDY4Q4G0A6 757 aa18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 ARSIQ5FYB1 569 aa18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 MEX3DQ86XN8 651 aaKnown RBP18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 AP2M1Q96CW1 435 aa18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 MKRN2Q9H000 416 aaKnown RBP18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 SPG21Q9NZD8 308 aa18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 LRRK1Q38SD2 2015 aa18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 SGK494L7N484 410 aa18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 EPPINO95925 133 aa18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 GJA1P17302 382 aa18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 EVI2BP34910 448 aa18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 FRKP42685 505 aaPredicted RBP18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 RECQLP46063 649 aaPredicted RBP18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 TLE2Q04725 743 aa18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 OLIG3Q7RTU3 272 aa18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 MRGPREQ86SM8 312 aa18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 TMEM25Q86YD3 366 aa18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 ELMOD2Q8IZ81 293 aa18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 ZNF689Q96CS4 500 aaPredicted RBP18.47■□□□□ 0.55
PDLIM3-212ENST00000620787 TSPAN11A1L157 253 aa18.46■□□□□ 0.55
PDLIM3-212ENST00000620787 ORC5O43913 435 aa18.46■□□□□ 0.55
PDLIM3-212ENST00000620787 PLOD3O60568 738 aa18.46■□□□□ 0.55
PDLIM3-212ENST00000620787 LILRB5O75023 590 aa18.46■□□□□ 0.55
PDLIM3-212ENST00000620787 PKLRP30613 574 aa18.46■□□□□ 0.55
PDLIM3-212ENST00000620787 MAB21L1Q13394 359 aa18.46■□□□□ 0.55
PDLIM3-212ENST00000620787 DPPA4Q7L190 304 aa18.46■□□□□ 0.55
PDLIM3-212ENST00000620787 FAM129CQ86XR2 697 aa18.46■□□□□ 0.55
PDLIM3-212ENST00000620787 LINC00471Q8N535 108 aa18.46■□□□□ 0.55
PDLIM3-212ENST00000620787 GFM1Q96RP9 751 aaKnown RBP18.46■□□□□ 0.55
PDLIM3-212ENST00000620787 SAP130Q9H0E3 1048 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms