RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ZNF23P17027 643 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 ZNF26P17031 533 aaPredicted RBP4.91□□□□□ -1.62
SHMT1-211ENST00000618902 LBPP18428 481 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 HIST1H1TP22492 207 aaPredicted RBP4.91□□□□□ -1.62
SHMT1-211ENST00000618902 FASP25445 335 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 PTX3P26022 381 aaPredicted RBP4.91□□□□□ -1.62
SHMT1-211ENST00000618902 EPHA3P29320 983 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 PPP2R1BP30154 601 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 OTX2P32243 289 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 ARL1P40616 181 aaPredicted RBP4.91□□□□□ -1.62
SHMT1-211ENST00000618902 EMP2P54851 167 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 AQP4P55087 323 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 LIM2P55344 173 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 NME5P56597 212 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 RAB38P57729 211 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 EEFSECP57772 596 aaKnown RBP4.91□□□□□ -1.62
SHMT1-211ENST00000618902 PHEXP78562 749 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 ID2Q02363 134 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 EEF1A2Q05639 463 aaKnown RBP4.91□□□□□ -1.62
SHMT1-211ENST00000618902 DUSP2Q05923 314 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 Q0VFX4 171 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 NFATC3Q12968 1075 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 MAD2L1Q13257 205 aaPredicted RBP4.91□□□□□ -1.62
SHMT1-211ENST00000618902 ATP1A4Q13733 1029 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 TUBA3CQ13748 450 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 LY6DQ14210 128 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 PCOLCEQ15113 449 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 RPS6KA2Q15349 733 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 TLR1Q15399 786 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 SFT2D3Q587I9 215 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 CRB2Q5IJ48 1285 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 C18orf63Q68DL7 685 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 PLAG1Q6DJT9 500 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 FAAH2Q6GMR7 532 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 OR4C11Q6IEV9 310 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 C8orf82Q6P1X6 216 aaPredicted RBP4.91□□□□□ -1.62
SHMT1-211ENST00000618902 QSOX2Q6ZRP7 698 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 ZBTB49Q6ZSB9 765 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 COMMD6Q7Z4G1 85 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 TRIM46Q7Z4K8 759 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 MIER2Q8N344 545 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 METTL4Q8N3J2 472 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 C1orf52Q8N6N3 182 aaKnown RBP4.91□□□□□ -1.62
SHMT1-211ENST00000618902 POU5F2Q8N7G0 328 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 FAM47BQ8NA70 645 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 GALNT11Q8NCW6 608 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 PAPD5Q8NDF8 572 aaKnown RBP4.91□□□□□ -1.62
SHMT1-211ENST00000618902 BHLHE22Q8NFJ8 381 aaPredicted RBP4.91□□□□□ -1.62
SHMT1-211ENST00000618902 OR52E4Q8NGH9 312 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 ZFP28Q8NHY6 868 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 FBXO27Q8NI29 283 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 ZNF420Q8TAQ5 688 aaPredicted RBP4.91□□□□□ -1.62
SHMT1-211ENST00000618902 M1APQ8TC57 530 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 AGR3Q8TD06 166 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 MIPOL1Q8TD10 442 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 CHTF18Q8WVB6 975 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 SELENOMQ8WWX9 145 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 HAS2Q92819 552 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 RGMAQ96B86 450 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 ANKRD9Q96BM1 317 aaPredicted RBP4.91□□□□□ -1.62
SHMT1-211ENST00000618902 TBC1D20Q96BZ9 403 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 KCNC2Q96PR1 638 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 OR52B2Q96RD2 323 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 TBCDQ9BTW9 1192 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 CRB3Q9BUF7 120 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 BDH2Q9BUT1 245 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 YIPF2Q9BWQ6 316 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 ANKRD60Q9BZ19 345 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 ZNF700Q9H0M5 742 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 ELOVL6Q9H5J4 265 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 CLMPQ9H6B4 373 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 WDR55Q9H6Y2 383 aaPredicted RBP4.91□□□□□ -1.62
SHMT1-211ENST00000618902 DDX31Q9H8H2 851 aaKnown RBP4.91□□□□□ -1.62
SHMT1-211ENST00000618902 NECTIN3Q9NQS3 549 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 SDR39U1Q9NRG7 319 aaPredicted RBP4.91□□□□□ -1.62
SHMT1-211ENST00000618902 AGPAT4Q9NRZ5 378 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 TEX10Q9NXF1 929 aaPredicted RBP4.91□□□□□ -1.62
SHMT1-211ENST00000618902 ETAA1Q9NY74 926 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 ADA2Q9NZK5 511 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 ABCD2Q9UBJ2 740 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 RIMS3Q9UJD0 308 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 C3orf18Q9UK00 162 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 RALYQ9UKM9 306 aaKnown RBP4.91□□□□□ -1.62
SHMT1-211ENST00000618902 DAPP1Q9UN19 280 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 EXO1Q9UQ84 846 aaKnown RBP4.91□□□□□ -1.62
SHMT1-211ENST00000618902 B3GNT3Q9Y2A9 372 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 DLGAP4Q9Y2H0 992 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 FIS1Q9Y3D6 152 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 MMACHCQ9Y4U1 282 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 DNAJC15Q9Y5T4 150 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 COPG1Q9Y678 874 aaKnown RBP4.91□□□□□ -1.62
SHMT1-211ENST00000618902 AP4B1Q9Y6B7 739 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 SPACA6W5XKT8 324 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 NUP210LQ5VU65 1888 aa4.9□□□□□ -1.62
SHMT1-211ENST00000618902 NSG1A0A0A6YYJ2 146 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 A0A1W2PP18 115 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 TRIM64A6NGJ6 449 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 TRIM64CA6NLI5 447 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 IDSB3KWA1 339 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 NPIPB8E9PQR5 432 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms