RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 USP9YO00507 2555 aaPredicted RBP7.62□□□□□ -1.19
NEK3-209ENST00000618856 DOPEY1Q5JWR5 2465 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 RP1L1Q8IWN7 2480 aaPredicted RBP7.61□□□□□ -1.19
NEK3-209ENST00000618856 C2orf92A0A1B0GVN3 265 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 ANKRD33BA6NCL7 494 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 WIPF3A6NGB9 483 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 A8MVJ9 347 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 ZNF195O14628 629 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 SASH3O75995 380 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 WISP2O76076 250 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 HSPA4LO95757 839 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 UQCRHP07919 91 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 CT45A8P0DMV1 189 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 CT45A9P0DMV2 189 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 PRPS2P11908 318 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 PCSK2P16519 638 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 DRD5P21918 477 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 MPIP34949 423 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 MAP3K8P41279 467 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 PPICP45877 212 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 ASMTP46597 345 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 ALDH9A1P49189 494 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 DCAF7P61962 342 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 RPL38P63173 70 aaKnown RBP7.61□□□□□ -1.19
NEK3-209ENST00000618856 PSPHP78330 225 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 MRPS35P82673 323 aaKnown RBP7.61□□□□□ -1.19
NEK3-209ENST00000618856 PMP22Q01453 160 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 EMX2Q04743 252 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 FOXO1Q12778 655 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 ZNF385BQ569K4 471 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 CT45A2Q5DJT8 189 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 RNFT1Q5M7Z0 435 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 EXOSC6Q5RKV6 272 aaKnown RBP7.61□□□□□ -1.19
NEK3-209ENST00000618856 HHATQ5VTY9 493 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 TMEM81Q6P7N7 255 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 FAM180AQ6UWF9 173 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 IL20RBQ6UXL0 311 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 BNC2Q6ZN30 1099 aaPredicted RBP7.61□□□□□ -1.19
NEK3-209ENST00000618856 LARP4Q71RC2 724 aaKnown RBP eCLIP7.61□□□□□ -1.19
NEK3-209ENST00000618856 CAMKMTQ7Z624 323 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.61□□□□□ -1.19
NEK3-209ENST00000618856 DDIASQ8IXT1 998 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 OR2L13Q8N349 312 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 TMEM156Q8N614 296 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 PSD4Q8NDX1 1056 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 ADCY4Q8NFM4 1077 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 OR7G2Q8NG99 324 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 OR52R1Q8NGF1 315 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 OR9A2Q8NGT5 310 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 PSMA8Q8TAA3 256 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 SLC22A8Q8TCC7 542 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 AGR3Q8TD06 166 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 ASB15Q8WXK1 588 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 TMEM125Q96AQ2 219 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 EXOSC8Q96B26 276 aaKnown RBP7.61□□□□□ -1.19
NEK3-209ENST00000618856 ZBTB9Q96C00 473 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 COQ8BQ96D53 544 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 SPACA9Q96E40 222 aaPredicted RBP7.61□□□□□ -1.19
NEK3-209ENST00000618856 ELP4Q96EB1 424 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 MAELQ96JY0 434 aaKnown RBP7.61□□□□□ -1.19
NEK3-209ENST00000618856 VSTM2LQ96N03 204 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 BTBD9Q96Q07 612 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 SECISBP2Q96T21 854 aaKnown RBP7.61□□□□□ -1.19
NEK3-209ENST00000618856 GLIPR2Q9H4G4 154 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 AKTIPQ9H8T0 292 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 MEAF6Q9HAF1 191 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 TIMMDC1Q9NPL8 285 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 PFDN4Q9NQP4 134 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 ACSS1Q9NUB1 689 aaPredicted RBP7.61□□□□□ -1.19
NEK3-209ENST00000618856 OLAHQ9NV23 265 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 THAP1Q9NVV9 213 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 HPF1Q9NWY4 346 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 GIMAP2Q9UG22 337 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 BAIAP2L1Q9UHR4 511 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 CNOT11Q9UKZ1 510 aaKnown RBP7.61□□□□□ -1.19
NEK3-209ENST00000618856 C19orf53Q9UNZ5 99 aaPredicted RBP7.61□□□□□ -1.19
NEK3-209ENST00000618856 ENTPD4Q9Y227 616 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 CFL2Q9Y281 166 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 KLF13Q9Y2Y9 288 aaPredicted RBP7.61□□□□□ -1.19
NEK3-209ENST00000618856 FIS1Q9Y3D6 152 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 CHCHD2Q9Y6H1 151 aaPredicted RBP7.61□□□□□ -1.19
NEK3-209ENST00000618856 SETXQ7Z333 2677 aaKnown RBP7.61□□□□□ -1.19
NEK3-209ENST00000618856 NBPF19A0A087WUL8 3843 aa7.61□□□□□ -1.19
NEK3-209ENST00000618856 ATP6AP2A0A1C7CYW4 349 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 PINLYPA6NC86 204 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 ANKUB1A6NFN9 424 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 KLRC4-KLRK1H3BQV0 150 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 UPK1AO00322 258 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 ANKRD28O15084 1053 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 ACOX3O15254 700 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 PEX1O43933 1283 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 PEX11AO75192 247 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 SKAP2O75563 359 aaPredicted RBP7.6□□□□□ -1.19
NEK3-209ENST00000618856 ATP6AP2O75787 350 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 STSP08842 583 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 CNR1P21554 472 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 ABCD3P28288 659 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 MAPK1P28482 360 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 PTGER1P34995 402 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 MRPL49Q13405 166 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms