RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 SNX11Q9Y5W9 270 aa11.67□□□□□ -0.54
MATR3-227ENST00000618441 TLR4O00206 839 aa11.67□□□□□ -0.54
MATR3-227ENST00000618441 DCLK1O15075 740 aa11.67□□□□□ -0.54
MATR3-227ENST00000618441 RGS14O43566 566 aa11.67□□□□□ -0.54
MATR3-227ENST00000618441 OR10H3O60404 316 aa11.67□□□□□ -0.54
MATR3-227ENST00000618441 OLFM2O95897 454 aa11.67□□□□□ -0.54
MATR3-227ENST00000618441 S1PR4O95977 384 aa11.67□□□□□ -0.54
MATR3-227ENST00000618441 HLA-DQB2P05538 268 aa11.67□□□□□ -0.54
MATR3-227ENST00000618441 CRYBA1P05813 215 aa11.67□□□□□ -0.54
MATR3-227ENST00000618441 SLC6A4P31645 630 aa11.67□□□□□ -0.54
MATR3-227ENST00000618441 PTGFRP43088 359 aa11.67□□□□□ -0.54
MATR3-227ENST00000618441 HABP2Q14520 560 aaPredicted RBP11.67□□□□□ -0.54
MATR3-227ENST00000618441 MEGF10Q96KG7 1140 aa11.67□□□□□ -0.54
MATR3-227ENST00000618441 UNKLQ9H9P5 680 aaKnown RBP11.67□□□□□ -0.54
MATR3-227ENST00000618441 LRTM1Q9HBL6 345 aa11.67□□□□□ -0.54
MATR3-227ENST00000618441 TREM1Q9NP99 234 aa11.67□□□□□ -0.54
MATR3-227ENST00000618441 KIF25Q9UIL4 384 aa11.67□□□□□ -0.54
MATR3-227ENST00000618441 ASF1AQ9Y294 204 aa11.67□□□□□ -0.54
MATR3-227ENST00000618441 CDK5RAP2Q96SN8 1893 aa11.67□□□□□ -0.54
MATR3-227ENST00000618441 HYKKA2RU49 373 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 ZNF705EA8MWA4 302 aaPredicted RBP11.66□□□□□ -0.54
MATR3-227ENST00000618441 AIPO00170 330 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 CACNG3O60359 315 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 FARS2O95363 451 aaKnown RBP11.66□□□□□ -0.54
MATR3-227ENST00000618441 SERPINA3P01011 423 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 GSK3AP49840 483 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 CTSCP53634 463 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 BLOC1S1P78537 153 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 ZPBP2Q6X784 338 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 SERPINA12Q8IW75 414 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 FOXJ1Q92949 421 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 PPP3R2Q96LZ3 170 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 ZNF251Q9BRH9 671 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 SPATC1LQ9H0A9 340 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 ZNF334Q9HCZ1 680 aaPredicted RBP11.66□□□□□ -0.54
MATR3-227ENST00000618441 NMRK2Q9NPI5 230 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 WWOXQ9NZC7 414 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 PURGQ9UJV8 347 aaKnown RBP11.66□□□□□ -0.54
MATR3-227ENST00000618441 POMT2Q9UKY4 750 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 RNF24Q9Y225 148 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 FER1L6Q2WGJ9 1857 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 WRBO00258 174 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 AKR7A3O95154 331 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 HBQ1P09105 142 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 PTX3P26022 381 aaPredicted RBP11.66□□□□□ -0.54
MATR3-227ENST00000618441 MAPK3P27361 379 aaPredicted RBP11.66□□□□□ -0.54
MATR3-227ENST00000618441 EFNA5P52803 228 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 RBM39Q14498 530 aaKnown RBP11.66□□□□□ -0.54
MATR3-227ENST00000618441 TAF1AQ15573 450 aaPredicted RBP11.66□□□□□ -0.54
MATR3-227ENST00000618441 BPIFCQ8NFQ6 507 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 AKR7LQ8NHP1 331 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 C3orf49Q96BT1 292 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 PKP4Q99569 1192 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 CTPS2Q9NRF8 586 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 IMP3Q9NV31 184 aaKnown RBP11.66□□□□□ -0.54
MATR3-227ENST00000618441 NDRG3Q9UGV2 375 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 POLR2AP24928 1970 aaKnown RBP11.66□□□□□ -0.54
MATR3-227ENST00000618441 SCAMP1O15126 338 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 MSCO60682 206 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 EIF1BO60739 113 aaKnown RBP11.66□□□□□ -0.54
MATR3-227ENST00000618441 HPXP02790 462 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 USP17L7P0C7H9 530 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 XPAP23025 273 aaPredicted RBP11.66□□□□□ -0.54
MATR3-227ENST00000618441 S100PP25815 95 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 HOXC12P31275 282 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 EIF1P41567 113 aaKnown RBP11.66□□□□□ -0.54
MATR3-227ENST00000618441 EEF1A1P68104 462 aaKnown RBP11.66□□□□□ -0.54
MATR3-227ENST00000618441 EEF1A2Q05639 463 aaKnown RBP11.66□□□□□ -0.54
MATR3-227ENST00000618441 ABHD18Q0P651 414 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 PAFAH1B3Q15102 231 aaKnown RBP11.66□□□□□ -0.54
MATR3-227ENST00000618441 EEF1A1P5Q5VTE0 462 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 OR5M10Q6IEU7 315 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 C1orf122Q6ZSJ8 110 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 MEX3DQ86XN8 651 aaKnown RBP11.66□□□□□ -0.54
MATR3-227ENST00000618441 CNOT9Q92600 299 aaKnown RBP11.66□□□□□ -0.54
MATR3-227ENST00000618441 ZBED3Q96IU2 234 aaPredicted RBP11.66□□□□□ -0.54
MATR3-227ENST00000618441 LURAP1Q96LR2 239 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 CCDC115Q96NT0 180 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 ULBP1Q9BZM6 244 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 TMEM231Q9H6L2 316 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 TPT1P8Q9HAU6 139 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 NOD1Q9Y239 953 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 AKT3Q9Y243 479 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 USP3Q9Y6I4 520 aa11.66□□□□□ -0.54
MATR3-227ENST00000618441 CCL15-CCL14A0A0B4J2E2 113 aa11.65□□□□□ -0.54
MATR3-227ENST00000618441 A0A1W2PPK0 400 aa11.65□□□□□ -0.54
MATR3-227ENST00000618441 OR6C68A6NDL8 312 aa11.65□□□□□ -0.54
MATR3-227ENST00000618441 ELK1P19419 428 aa11.65□□□□□ -0.54
MATR3-227ENST00000618441 GJA5P36382 358 aa11.65□□□□□ -0.54
MATR3-227ENST00000618441 AKR1C3P42330 323 aa11.65□□□□□ -0.54
MATR3-227ENST00000618441 SLC11A2P49281 568 aa11.65□□□□□ -0.54
MATR3-227ENST00000618441 RNF4P78317 190 aa11.65□□□□□ -0.54
MATR3-227ENST00000618441 EIF4HQ15056 248 aaKnown RBP11.65□□□□□ -0.54
MATR3-227ENST00000618441 CCL15Q16663 113 aa11.65□□□□□ -0.54
MATR3-227ENST00000618441 VMACQ2NL98 169 aa11.65□□□□□ -0.54
MATR3-227ENST00000618441 HECTD3Q5T447 861 aa11.65□□□□□ -0.54
MATR3-227ENST00000618441 AVPI1Q5T686 147 aa11.65□□□□□ -0.54
MATR3-227ENST00000618441 RGS7BPQ6MZT1 257 aaPredicted RBP11.65□□□□□ -0.54
MATR3-227ENST00000618441 SLC27A4Q6P1M0 643 aa11.65□□□□□ -0.54
MATR3-227ENST00000618441 DPPA2Q7Z7J5 298 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms