RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 PRKNO60260 465 aaPredicted RBP4.27□□□□□ -1.73
CUL3-216ENST00000617432 CCNT2O60583 730 aaKnown RBP4.27□□□□□ -1.73
CUL3-216ENST00000617432 GALR3O60755 368 aaPredicted RBP4.27□□□□□ -1.73
CUL3-216ENST00000617432 SUPT3HO75486 399 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 PRSS23O95084 383 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 ACSL3O95573 720 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 WDPCPO95876 746 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 C8orf89P0DMQ9 161 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 SMIM10L1P0DMW3 83 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 PIM1P11309 404 aaPredicted RBP4.27□□□□□ -1.73
CUL3-216ENST00000617432 MTHFD2P13995 350 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 ALOX12P18054 663 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 TFEBP19484 476 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 SLC6A2P23975 617 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 MST1P26927 711 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 CERS1P27544 350 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 PIK3CGP48736 1102 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 AP1S2P56377 157 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 SOX8P57073 446 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 KCNK10P57789 538 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 RAB10P61026 200 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 ID2Q02363 134 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 CALCOCO2Q13137 446 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 MFAP5Q13361 173 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 FAM53BQ14153 422 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 UAP1Q16222 522 aaPredicted RBP4.27□□□□□ -1.73
CUL3-216ENST00000617432 SFT2D3Q587I9 215 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 GARNL3Q5VVW2 1013 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 LRRC8EQ6NSJ5 796 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 ZNF529Q6P280 563 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 PAPD4Q6PIY7 484 aaKnown RBP4.27□□□□□ -1.73
CUL3-216ENST00000617432 IGFL2Q6UWQ7 119 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 ZNF793Q6ZN11 406 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 NCCRP1Q6ZVX7 275 aaPredicted RBP4.27□□□□□ -1.73
CUL3-216ENST00000617432 FRA10AC1Q70Z53 315 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 NDUFAF7Q7L592 441 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 CLNKQ7Z7G1 428 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 GPSM1Q86YR5 675 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 CRLF3Q8IUI8 442 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 WDR75Q8IWA0 830 aaKnown RBP4.27□□□□□ -1.73
CUL3-216ENST00000617432 KLHDC8AQ8IYD2 350 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 BEST3Q8N1M1 668 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 CA13Q8N1Q1 262 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 NKAPQ8N5F7 415 aaKnown RBP4.27□□□□□ -1.73
CUL3-216ENST00000617432 ZNF321PQ8N8H1 164 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 SNX31Q8N9S9 440 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 FAM47BQ8NA70 645 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 ZBTB8BQ8NAP8 495 aaPredicted RBP4.27□□□□□ -1.73
CUL3-216ENST00000617432 CAMKVQ8NCB2 501 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 NT5CQ8TCD5 201 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 GRHL3Q8TE85 626 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 CCT6BQ92526 530 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 UCN3Q969E3 161 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 MVB12AQ96EY5 273 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 MARS2Q96GW9 593 aaKnown RBP4.27□□□□□ -1.73
CUL3-216ENST00000617432 PDLIM5Q96HC4 596 aaKnown RBP4.27□□□□□ -1.73
CUL3-216ENST00000617432 SMIM10Q96HG1 83 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 IMMP1LQ96LU5 166 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 SIGLEC12Q96PQ1 595 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 TAAR6Q96RI8 345 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 ATOH8Q96SQ7 321 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 CYTH2Q99418 400 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 CPNE1Q99829 537 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 HAUS8Q9BT25 410 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 DERL2Q9GZP9 239 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 LHPPQ9H008 270 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 ZNF700Q9H0M5 742 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 CDC42EP4Q9H3Q1 356 aaKnown RBP4.27□□□□□ -1.73
CUL3-216ENST00000617432 LIN28AQ9H9Z2 209 aaKnown RBP4.27□□□□□ -1.73
CUL3-216ENST00000617432 ANKHQ9HCJ1 492 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 MKKSQ9NPJ1 570 aaPredicted RBP4.27□□□□□ -1.73
CUL3-216ENST00000617432 NRIP3Q9NQ35 241 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 SNX15Q9NRS6 342 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 C14orf105Q9NVL8 296 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 RNF14Q9UBS8 474 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 ERRFI1Q9UJM3 462 aaPredicted RBP4.27□□□□□ -1.73
CUL3-216ENST00000617432 ZNF223Q9UK11 482 aaPredicted RBP4.27□□□□□ -1.73
CUL3-216ENST00000617432 NXT1Q9UKK6 140 aaKnown RBP4.27□□□□□ -1.73
CUL3-216ENST00000617432 ZNF490Q9ULM2 529 aaPredicted RBP4.27□□□□□ -1.73
CUL3-216ENST00000617432 CORO1CQ9ULV4 474 aaPredicted RBP4.27□□□□□ -1.73
CUL3-216ENST00000617432 UTP11Q9Y3A2 253 aaKnown RBP4.27□□□□□ -1.73
CUL3-216ENST00000617432 COL12A1Q99715 3063 aa4.27□□□□□ -1.73
CUL3-216ENST00000617432 HECTD1Q9ULT8 2610 aa4.26□□□□□ -1.73
CUL3-216ENST00000617432 A0A1W2PQ72 361 aa4.26□□□□□ -1.73
CUL3-216ENST00000617432 A0A1W2PS29 197 aa4.26□□□□□ -1.73
CUL3-216ENST00000617432 WASHC1A8K0Z3 465 aa4.26□□□□□ -1.73
CUL3-216ENST00000617432 A8MUI8 341 aa4.26□□□□□ -1.73
CUL3-216ENST00000617432 H0YIG0 161 aa4.26□□□□□ -1.73
CUL3-216ENST00000617432 ERI3O43414 337 aaKnown RBP4.26□□□□□ -1.73
CUL3-216ENST00000617432 VPS4BO75351 444 aa4.26□□□□□ -1.73
CUL3-216ENST00000617432 UTP20O75691 2785 aaKnown RBP4.26□□□□□ -1.73
CUL3-216ENST00000617432 SIX3O95343 332 aaPredicted RBP4.26□□□□□ -1.73
CUL3-216ENST00000617432 CBX6O95503 412 aa4.26□□□□□ -1.73
CUL3-216ENST00000617432 ETHE1O95571 254 aa4.26□□□□□ -1.73
CUL3-216ENST00000617432 CLDN1O95832 211 aa4.26□□□□□ -1.73
CUL3-216ENST00000617432 IGHEP01854 428 aa4.26□□□□□ -1.73
CUL3-216ENST00000617432 ALDOAP04075 364 aaKnown RBP4.26□□□□□ -1.73
CUL3-216ENST00000617432 SERPINA7P05543 415 aa4.26□□□□□ -1.73
CUL3-216ENST00000617432 C2P06681 752 aa4.26□□□□□ -1.73
CUL3-216ENST00000617432 SLC35G6P0C7Q6 338 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms