RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 MEP1AQ16819 746 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 C14orf28Q4W4Y0 310 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 DEF8Q6ZN54 512 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 TMEM151BQ8IW70 566 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 NLGN4XQ8N0W4 816 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 ZNF655Q8N720 491 aaPredicted RBP7.31□□□□□ -1.24
NEK3-207ENST00000617054 CELF2-AS1Q8N7Q2 184 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 RCBTB1Q8NDN9 531 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.31□□□□□ -1.24
NEK3-207ENST00000617054 TMIGD2Q96BF3 282 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 REEP1Q9H902 201 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 FBXO34Q9NWN3 711 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 CPED1A4D0V7 1026 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 URADA6NGE7 173 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 H0YJX3 145 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 FFAR1O14842 300 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 ZSCAN9O15535 394 aaPredicted RBP7.31□□□□□ -1.24
NEK3-207ENST00000617054 HRO43593 1189 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 TBX19O60806 448 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 MFN2O95140 757 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 TFAP2AP05549 437 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 AGXTP21549 392 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 NT5EP21589 574 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 OR1D4P47884 311 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 ADARB1P78563 741 aaKnown RBP7.31□□□□□ -1.24
NEK3-207ENST00000617054 CHRNEQ04844 493 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 IFI44LQ53G44 452 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 C4orf48Q5BLP8 95 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 CRB2Q5IJ48 1285 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 TMPRSS9Q7Z410 1059 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 IQCHQ86VS3 1027 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 TSPYL5Q86VY4 417 aaPredicted RBP7.31□□□□□ -1.24
NEK3-207ENST00000617054 PRSS58Q8IYP2 241 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 CA13Q8N1Q1 262 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 LRRC25Q8N386 305 aaPredicted RBP7.31□□□□□ -1.24
NEK3-207ENST00000617054 PACRGLQ8N7B6 248 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 TTC29Q8NA56 475 aaPredicted RBP7.31□□□□□ -1.24
NEK3-207ENST00000617054 PIK3R3Q92569 461 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 MMABQ96EY8 250 aaPredicted RBP7.31□□□□□ -1.24
NEK3-207ENST00000617054 SLC35A4Q96G79 324 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 OR7D2Q96RA2 312 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 DUSP15Q9H1R2 295 aaPredicted RBP7.31□□□□□ -1.24
NEK3-207ENST00000617054 ADNPQ9H2P0 1102 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 GIMAP4Q9NUV9 329 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 DHCR7Q9UBM7 475 aaKnown RBP7.31□□□□□ -1.24
NEK3-207ENST00000617054 SEC14L3Q9UDX4 400 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 PSME2Q9UL46 239 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 ANGPT4Q9Y264 503 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 WBP11Q9Y2W2 641 aaKnown RBP7.31□□□□□ -1.24
NEK3-207ENST00000617054 PCDHGA8Q9Y5G5 932 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 DMXL1Q9Y485 3027 aa7.31□□□□□ -1.24
NEK3-207ENST00000617054 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 NPIPA5A0A0B4J1W7 369 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 CENPVL1A0A0U1RR11 272 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 NPIPA7E9PJI5 369 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 TGFBR3LH3BV60 316 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 TNFRSF11BO00300 401 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 FOXS1O43638 330 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 TNFAIP8O95379 198 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 CLPTM1O96005 669 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 CFIP05156 583 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 NPIPA8P0DM63 369 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 MAOAP21397 527 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 IGFBP5P24593 272 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 GSTM2P28161 218 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 TLX1P31314 330 aaPredicted RBP7.3□□□□□ -1.24
NEK3-207ENST00000617054 DAB2P98082 770 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 ZXDAP98168 799 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 RBBP4Q09028 425 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 SLC13A2Q13183 592 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 PIN1Q13526 163 aaPredicted RBP7.3□□□□□ -1.24
NEK3-207ENST00000617054 EXOC3L2Q2M3D2 409 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 WDR45BQ5MNZ6 344 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 MLIPQ5VWP3 458 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 LYSMD4Q5XG99 296 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 SHQ1Q6PI26 577 aaKnown RBP7.3□□□□□ -1.24
NEK3-207ENST00000617054 LYPD8Q6UX82 237 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 SLC36A4Q6YBV0 504 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 VRK2Q86Y07 508 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 ARMC8Q8IUR7 673 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 PSMA8Q8TAA3 256 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 CDS1Q92903 461 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 GTPBP3Q969Y2 492 aaKnown RBP7.3□□□□□ -1.24
NEK3-207ENST00000617054 GIMAP5Q96F15 307 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 FEVQ99581 238 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 NIPSNAP1Q9BPW8 284 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 RBM4BQ9BQ04 359 aaKnown RBP7.3□□□□□ -1.24
NEK3-207ENST00000617054 NUDT22Q9BRQ3 303 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 RBM4Q9BWF3 364 aaKnown RBP7.3□□□□□ -1.24
NEK3-207ENST00000617054 SYNDIG1Q9H7V2 258 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 BATF3Q9NR55 127 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 SEMA3GQ9NS98 782 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 LYARQ9NX58 379 aaKnown RBP7.3□□□□□ -1.24
NEK3-207ENST00000617054 GMEB1Q9Y692 573 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 M0R129 80 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 ZIC2O95409 532 aaPredicted RBP7.3□□□□□ -1.24
NEK3-207ENST00000617054 EPPINO95925 133 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 CPMP14384 443 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 ETS2P15036 469 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 MYF6P23409 242 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms