RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.88■□□□□ 0.292e-7■■■■□ 22.2
ATXN2-227ENST00000616825 ELP5Q8TE02 316 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 C16orf78Q8WTQ4 265 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 ISOC1Q96CN7 298 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 STRA6Q9BX79 667 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 CA14Q9ULX7 337 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 ADAMTS5Q9UNA0 930 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 ENTPD2Q9Y5L3 495 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 UBR1Q8IWV7 1749 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 M0R129 80 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 LCN1P31025 176 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 HLCSP50747 726 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 RIDAP52758 137 aaKnown RBP16.87■□□□□ 0.29
ATXN2-227ENST00000616825 ACTA2P62736 377 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 ACTG2P63267 376 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 ARSKQ6UWY0 536 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 ZNF709Q8N972 641 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 MSLNLQ96KJ4 702 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 RXFP3Q9NSD7 469 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 PAK1IP1Q9NWT1 392 aaPredicted RBP16.87■□□□□ 0.29
ATXN2-227ENST00000616825 PIK3C2AO00443 1686 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 PCP4L1A6NKN8 68 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 GNRHRP30968 328 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 ACVR1BP36896 505 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 NOVP48745 357 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 CD97P48960 835 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 SIX1Q15475 284 aaPredicted RBP16.87■□□□□ 0.29
ATXN2-227ENST00000616825 PLEKHN1Q494U1 663 aaPredicted RBP16.87■□□□□ 0.29
ATXN2-227ENST00000616825 IER5LQ5T953 404 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 MAMDC2Q7Z304 686 aaPredicted RBP16.87■□□□□ 0.29
ATXN2-227ENST00000616825 LAS2Q8IYD9 372 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 HS3ST5Q8IZT8 346 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 ACVR1CQ8NER5 493 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 NELL2Q99435 816 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 HOXD1Q9GZZ0 328 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 RDH8Q9NYR8 311 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 NUP50Q9UKX7 468 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 A0A1W2PPK0 400 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 I3L521 148 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 P04436 131 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 FAM189BP81408 668 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 SERTAD2Q14140 314 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 CHRFAM7AQ494W8 412 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 PIGGQ5H8A4 983 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 RPLP0P6Q8NHW5 317 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 CRYGNQ8WXF5 182 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 MTG2Q9H4K7 406 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 ANTXRLA6NF34 631 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 LATO43561 262 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 CDC40O60508 579 aaKnown RBP eCLIP16.87■□□□□ 0.294e-7■□□□□ 10.6
ATXN2-227ENST00000616825 ARHGEF15O94989 841 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 GNAO1P09471 354 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 RPS3P23396 243 aaKnown RBP eCLIP16.87■□□□□ 0.29
ATXN2-227ENST00000616825 AIMP2Q13155 320 aaKnown RBP16.87■□□□□ 0.29
ATXN2-227ENST00000616825 GRHL2Q6ISB3 625 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 ZSCAN1Q8NBB4 408 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 PITX2Q99697 317 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 ZNF701Q9NV72 531 aaPredicted RBP16.87■□□□□ 0.29
ATXN2-227ENST00000616825 NUFIP1Q9UHK0 495 aaKnown RBP16.87■□□□□ 0.29
ATXN2-227ENST00000616825 FBXL3Q9UKT7 428 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 ABCG2Q9UNQ0 655 aa16.87■□□□□ 0.29
ATXN2-227ENST00000616825 DNAJC13O75165 2243 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 TRAPPC13A5PLN9 417 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 ATP6V1G1O75348 118 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 SNAPC5O75971 98 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 RNF144AP50876 292 aaPredicted RBP16.86■□□□□ 0.29
ATXN2-227ENST00000616825 CASP6P55212 293 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 ARSJQ5FYB0 599 aaPredicted RBP16.86■□□□□ 0.29
ATXN2-227ENST00000616825 CLLU1OSQ5K130 101 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 LCN8Q6JVE9 175 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 VTCN1Q7Z7D3 282 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 ATG5Q9H1Y0 275 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 GDE1Q9NZC3 331 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 JRKO75564 520 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 PRSS56P0CW18 603 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 MTNR1AP48039 350 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 SNTB2Q13425 540 aaKnown RBP16.86■□□□□ 0.29
ATXN2-227ENST00000616825 ELOAQ14241 798 aaKnown RBP16.86■□□□□ 0.29
ATXN2-227ENST00000616825 MFSD13AQ14CX5 517 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 PIAS4Q8N2W9 510 aaPredicted RBP16.86■□□□□ 0.29
ATXN2-227ENST00000616825 CREB3L4Q8TEY5 395 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 FAM3CQ92520 227 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 HSPE1-MOB4S4R3N1 261 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 LRRTM2O43300 516 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 CD68P34810 354 aaPredicted RBP16.86■□□□□ 0.29
ATXN2-227ENST00000616825 MAGEA8P43361 318 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 MAP2K4P45985 399 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 GPR4P46093 362 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 HNRNPA1L2Q32P51 320 aaKnown RBP16.86■□□□□ 0.29
ATXN2-227ENST00000616825 MPP7Q5T2T1 576 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 CARD17Q5XLA6 110 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 TSPYL5Q86VY4 417 aaPredicted RBP16.86■□□□□ 0.29
ATXN2-227ENST00000616825 KLBQ86Z14 1044 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 GPR137CQ8N3F9 429 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 NECAB3Q96P71 396 aaPredicted RBP16.86■□□□□ 0.29
ATXN2-227ENST00000616825 ZNF559Q9BR84 538 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 ABCG5Q9H222 651 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 SDR39U1Q9NRG7 319 aaPredicted RBP16.86■□□□□ 0.29
ATXN2-227ENST00000616825 FAM118AQ9NWS6 357 aa16.86■□□□□ 0.29
ATXN2-227ENST00000616825 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms