RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 WLSQ5T9L3 541 aa17.44■□□□□ 0.38
CDX1-202ENST00000616154 RPS27LQ71UM5 84 aaKnown RBP17.44■□□□□ 0.38
CDX1-202ENST00000616154 TMEM200AQ86VY9 491 aa17.44■□□□□ 0.38
CDX1-202ENST00000616154 SLC22A9Q8IVM8 553 aa17.44■□□□□ 0.38
CDX1-202ENST00000616154 ST13P4Q8IZP2 240 aaPredicted RBP17.44■□□□□ 0.38
CDX1-202ENST00000616154 METTL4Q8N3J2 472 aa17.44■□□□□ 0.38
CDX1-202ENST00000616154 FBXW8Q8N3Y1 598 aa17.44■□□□□ 0.38
CDX1-202ENST00000616154 L3HYPDHQ96EM0 354 aa17.44■□□□□ 0.38
CDX1-202ENST00000616154 PELOQ9BRX2 385 aaKnown RBP17.44■□□□□ 0.38
CDX1-202ENST00000616154 ZFP64Q9NPA5 681 aa17.44■□□□□ 0.38
CDX1-202ENST00000616154 SPRR3Q9UBC9 169 aa17.44■□□□□ 0.38
CDX1-202ENST00000616154 EMCNQ9ULC0 261 aa17.44■□□□□ 0.38
CDX1-202ENST00000616154 BOKQ9UMX3 212 aaPredicted RBP17.44■□□□□ 0.38
CDX1-202ENST00000616154 NF1P21359 2839 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 AKAP6Q13023 2319 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 FAM47E-STBD1D6RA91 191 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 COPEO14579 308 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 GPR75O95800 540 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 AIFM1O95831 613 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 FBXO45P0C2W1 286 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 NR2F6P10588 404 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 CD1EP15812 388 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 IMPDH1P20839 514 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 KCNJ2P63252 427 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 MYBPHQ13203 477 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 MPP2Q14168 576 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 SLC25A35Q3KQZ1 300 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 LIX1LQ8IVB5 337 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 TRPC4APQ8TEL6 797 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 ELOVL6Q9H5J4 265 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 EXO5Q9H790 373 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 QPCTLQ9NXS2 382 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 CNIH4Q9P003 139 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 GRID1Q9ULK0 1009 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 SNX6Q9UNH7 406 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 PLLPQ9Y342 182 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 L3MBTL1Q9Y468 752 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 PCDHGB3Q9Y5G1 929 aa17.43■□□□□ 0.38
CDX1-202ENST00000616154 EXPH5Q8NEV8 1989 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 LRRC3CA6NJW4 275 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 PRKRAO75569 313 aaKnown RBP17.42■□□□□ 0.38
CDX1-202ENST00000616154 RFPL3SP0C7P2 107 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 HSD3B1P14060 373 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 GABRA1P14867 456 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 HSD3B2P26439 372 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 ARL1P40616 181 aaPredicted RBP17.42■□□□□ 0.38
CDX1-202ENST00000616154 ETV4P43268 484 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 DLX5P56178 289 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 ERVK-8P63133 956 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 GALNT1Q10472 559 aaPredicted RBP17.42■□□□□ 0.38
CDX1-202ENST00000616154 HSP90B2PQ58FF3 399 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 RIPPLY2Q5TAB7 128 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 PRAMEF20Q5VT98 475 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 OR52E8Q6IFG1 317 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 CYP20A1Q6UW02 462 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 RNF111Q6ZNA4 994 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 SLC29A4Q7RTT9 530 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 PAGE2Q7Z2X7 111 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 LRRC25Q8N386 305 aaPredicted RBP17.42■□□□□ 0.38
CDX1-202ENST00000616154 CNPPD1Q9BV87 410 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 WWTR1Q9GZV5 400 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 PROK2Q9HC23 129 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 ACKR4Q9NPB9 350 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 FARSBQ9NSD9 589 aaKnown RBP17.42■□□□□ 0.38
CDX1-202ENST00000616154 AHSPQ9NZD4 102 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 ERVK-19Q9WJR5 959 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 STK38LQ9Y2H1 464 aa17.42■□□□□ 0.38
CDX1-202ENST00000616154 CHCHD2Q9Y6H1 151 aaPredicted RBP17.42■□□□□ 0.38
CDX1-202ENST00000616154 TM9SF1O15321 606 aa17.41■□□□□ 0.38
CDX1-202ENST00000616154 PLIN3O60664 434 aa17.41■□□□□ 0.38
CDX1-202ENST00000616154 SPAG7O75391 227 aa17.41■□□□□ 0.38
CDX1-202ENST00000616154 SUPT7LO94864 414 aa17.41■□□□□ 0.38
CDX1-202ENST00000616154 ZWINTO95229 277 aa17.41■□□□□ 0.38
CDX1-202ENST00000616154 PROCP04070 461 aa17.41■□□□□ 0.38
CDX1-202ENST00000616154 SERPINB3P29508 390 aa17.41■□□□□ 0.38
CDX1-202ENST00000616154 SLC37A1P57057 533 aa17.41■□□□□ 0.38
CDX1-202ENST00000616154 NAA20P61599 178 aa17.41■□□□□ 0.38
CDX1-202ENST00000616154 EBPQ15125 230 aaKnown RBP17.41■□□□□ 0.38
CDX1-202ENST00000616154 TTC19Q6DKK2 380 aaPredicted RBP17.41■□□□□ 0.38
CDX1-202ENST00000616154 FAM13CQ8NE31 585 aa17.41■□□□□ 0.38
CDX1-202ENST00000616154 OR10G3Q8NGC4 313 aa17.41■□□□□ 0.38
CDX1-202ENST00000616154 TCP10LQ8TDR4 215 aa17.41■□□□□ 0.38
CDX1-202ENST00000616154 GAL3ST4Q96RP7 486 aa17.41■□□□□ 0.38
CDX1-202ENST00000616154 MRPL1Q9BYD6 325 aaKnown RBP17.41■□□□□ 0.38
CDX1-202ENST00000616154 WDR41Q9HAD4 459 aa17.41■□□□□ 0.38
CDX1-202ENST00000616154 TEX10Q9NXF1 929 aaPredicted RBP17.41■□□□□ 0.38
CDX1-202ENST00000616154 CNOT11Q9UKZ1 510 aaKnown RBP17.41■□□□□ 0.38
CDX1-202ENST00000616154 TMEM120BA0PK00 339 aa17.4■□□□□ 0.38
CDX1-202ENST00000616154 OR6C76A6NM76 312 aa17.4■□□□□ 0.38
CDX1-202ENST00000616154 G3V2L1 256 aa17.4■□□□□ 0.38
CDX1-202ENST00000616154 OR10H2O60403 315 aa17.4■□□□□ 0.38
CDX1-202ENST00000616154 OR4F21O95013 312 aa17.4■□□□□ 0.38
CDX1-202ENST00000616154 PDYNP01213 254 aa17.4■□□□□ 0.38
CDX1-202ENST00000616154 DHRS4L1P0CG22 281 aa17.4■□□□□ 0.38
CDX1-202ENST00000616154 SLC35E2P0CK97 266 aa17.4■□□□□ 0.38
CDX1-202ENST00000616154 TSPAN8P19075 237 aa17.4■□□□□ 0.38
CDX1-202ENST00000616154 DNAJA1P31689 397 aaKnown RBP17.4■□□□□ 0.38
CDX1-202ENST00000616154 ART1P52961 327 aa17.4■□□□□ 0.38
CDX1-202ENST00000616154 PKNOX1P55347 436 aa17.4■□□□□ 0.38
CDX1-202ENST00000616154 LCP2Q13094 533 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms