RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 PKP4Q99569 1192 aa10.61□□□□□ -0.71
ATF3-211ENST00000613954 ZSCAN5AQ9BUG6 496 aa10.61□□□□□ -0.71
ATF3-211ENST00000613954 GIMAP4Q9NUV9 329 aa10.61□□□□□ -0.71
ATF3-211ENST00000613954 RBFOX1Q9NWB1 397 aaKnown RBP10.61□□□□□ -0.71
ATF3-211ENST00000613954 CLDND1Q9NY35 253 aa10.61□□□□□ -0.71
ATF3-211ENST00000613954 STMN3Q9NZ72 180 aa10.61□□□□□ -0.71
ATF3-211ENST00000613954 ACSL6Q9UKU0 697 aa10.61□□□□□ -0.71
ATF3-211ENST00000613954 ICKQ9UPZ9 632 aa10.61□□□□□ -0.71
ATF3-211ENST00000613954 PCDHGB7Q9Y5F8 929 aa10.61□□□□□ -0.71
ATF3-211ENST00000613954 DOCK8Q8NF50 2099 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 WWP2O00308 870 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 FFAR1O14842 300 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 PLA2G10O15496 165 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 CRYZL1O95825 349 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 RECKO95980 971 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 MSL3P1P0C860 447 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 SLC2A2P11168 524 aaPredicted RBP10.6□□□□□ -0.71
ATF3-211ENST00000613954 ALAS2P22557 587 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 PKLRP30613 574 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 WNT4P56705 351 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 EFR3AQ14156 821 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 PUM1Q14671 1186 aaKnown RBP eCLIP10.6□□□□□ -0.719e-8■■□□□ 13
ATF3-211ENST00000613954 ZNF284Q2VY69 593 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 LEXMQ3ZCV2 418 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 ZNF628Q5EBL2 1059 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 HENMT1Q5T8I9 393 aaKnown RBP10.6□□□□□ -0.71
ATF3-211ENST00000613954 MTSS1LQ765P7 747 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 TMPRSS11BQ86T26 416 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 PLA2G15Q8NCC3 412 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 OR5AK3PQ8NH89 298 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 SUN5Q8TC36 379 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 SCAMP4Q969E2 229 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 CIDECQ96AQ7 238 aaPredicted RBP10.6□□□□□ -0.71
ATF3-211ENST00000613954 CHFRQ96EP1 664 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 GTPBP2Q9BX10 602 aaKnown RBP10.6□□□□□ -0.71
ATF3-211ENST00000613954 A4GALTQ9NPC4 353 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 A0A0B4J293 547 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 TMEM129A0AVI4 362 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.6□□□□□ -0.71
ATF3-211ENST00000613954 PLD2O14939 933 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 PLXNA2O75051 1894 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 SLC16A8O95907 504 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 ACADMP11310 421 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 HTR2BP41595 481 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 METAP1P53582 386 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 TATDN3Q17R31 274 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 Q5BKY6 102 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 C22orf42Q6IC83 251 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 ADNP2Q6IQ32 1131 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 CD300LDQ6UXZ3 194 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 ZNF730Q6ZMV8 503 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 CREB3L2Q70SY1 520 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 TRIM48Q8IWZ4 208 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 CADM2Q8N3J6 435 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 YIPF7Q8N8F6 280 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 TMEM163Q8TC26 289 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 RNF31Q96EP0 1072 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 SLC6A18Q96N87 628 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 RIOK2Q9BVS4 552 aaKnown RBP10.6□□□□□ -0.71
ATF3-211ENST00000613954 TRIM39Q9HCM9 518 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 DMRT3Q9NQL9 472 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 SATB2Q9UPW6 733 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 DYRK1BQ9Y463 629 aa10.6□□□□□ -0.71
ATF3-211ENST00000613954 SPIN1Q9Y657 262 aaPredicted RBP10.6□□□□□ -0.71
ATF3-211ENST00000613954 DENND4AQ7Z401 1863 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 C1QTNF3-AMACRE9PGA6 284 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 FAM227AF5H4B4 570 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 SPINT1O43278 529 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 CPNE3O75131 537 aaKnown RBP10.59□□□□□ -0.71
ATF3-211ENST00000613954 SOX14O95416 240 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 CSF2P04141 144 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 CCNYL3P0C7X3 344 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 CFL1P23528 166 aaKnown RBP10.59□□□□□ -0.71
ATF3-211ENST00000613954 FGF9P31371 208 aaPredicted RBP10.59□□□□□ -0.71
ATF3-211ENST00000613954 NUDT1P36639 197 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 FEN1P39748 380 aaKnown RBP10.59□□□□□ -0.71
ATF3-211ENST00000613954 TGM4P49221 684 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 TAS2R50P59544 299 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 TPBGQ13641 420 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 GRIN2CQ14957 1233 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 MPEG1Q2M385 716 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.59□□□□□ -0.711e-6■■□□□ 11.6
ATF3-211ENST00000613954 SIGIRRQ6IA17 410 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 TCTN3Q6NUS6 607 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 PGBD2Q6P3X8 592 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 CEACAM20Q6UY09 585 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 QSOX2Q6ZRP7 698 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 FBXO15Q8NCQ5 510 aaPredicted RBP10.59□□□□□ -0.71
ATF3-211ENST00000613954 ATP6V1C2Q8NEY4 427 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 OR52I1Q8NGK6 324 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 UFD1Q92890 307 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 NEIL2Q969S2 332 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 UBE2E3Q969T4 207 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 ZNF354BQ96LW1 612 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 COQ10AQ96MF6 247 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 NECTIN4Q96NY8 510 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 COQ7Q99807 217 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 RPP25Q9BUL9 199 aaKnown RBP10.59□□□□□ -0.71
ATF3-211ENST00000613954 KATNB1Q9BVA0 655 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 PRSS16Q9NQE7 514 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms