RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 OLFM2O95897 454 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 CYP17A1P05093 508 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 TTPAP49638 278 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 MBTD1Q05BQ5 628 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 CLEC6AQ6EIG7 209 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 KCTD9Q7L273 389 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 SLC46A3Q7Z3Q1 461 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 GALNT10Q86SR1 603 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 TMEM151AQ8N4L1 468 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 POGLUT1Q8NBL1 392 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 BPIFCQ8NFQ6 507 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 OR1J1Q8NGS3 322 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 C2CD4CQ8TF44 421 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 RAB24Q969Q5 203 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 TAS2R16Q9NYV7 291 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 LRCH4O75427 683 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 HIST1H2ABP04908 130 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 CAMK2GQ13555 558 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 ABHD13Q7L211 337 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 HIST3H2AQ7L7L0 130 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 RNF180Q86T96 592 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 HIST1H2ACQ93077 130 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 FATE1Q969F0 183 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 SCMH1Q96GD3 660 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 UBQLN3Q9H347 655 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 WDCPQ9H6R7 721 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 ACSS1Q9NUB1 689 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 NLGN3Q9NZ94 848 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 PIP5K1CO60331 668 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 SLITRK3O94933 977 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 SPNP16150 400 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 LTKP29376 864 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 AKR1C2P52895 323 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 RPL38P63173 70 aaKnown RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 PCLAFQ15004 111 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 POMZP3Q6PJE2 187 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 CHST13Q8NET6 341 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 SCGB1C1Q8TD33 95 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 TMEM176AQ96HP8 235 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 PIGQQ9BRB3 760 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 MPTX1A8MV57 137 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 OR1I1O60431 355 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 EXOSC2Q13868 293 aaKnown RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 GPR33Q49SQ1 333 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 GXYLT1Q4G148 440 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 LPCAT3Q6P1A2 487 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 C1orf186Q6ZWK4 172 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 CRYBG2Q8N1P7 616 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 HAS1Q92839 578 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 SLC25A46Q96AG3 418 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 NIPSNAP3BQ9BS92 247 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 CRLS1Q9UJA2 301 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 KERAO60938 352 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 URODP06132 367 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 SLC16A13Q7RTY0 426 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 TMPRSS9Q7Z410 1059 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 C2orf15Q8WU43 125 aaKnown RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 C16orf58Q96GQ5 468 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 A0A1W2PS29 197 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF729A6NN14 1252 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 TMEM63AO94886 807 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 H1F0P07305 194 aaKnown RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 ASGR1P07306 291 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 S100A7P31151 101 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 OR10A3P58181 314 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 SPIN4Q56A73 249 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 KCNIP4Q6PIL6 250 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 FJX1Q86VR8 437 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 EID2Q8N6I1 236 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 DYNC2LI1Q8TCX1 351 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 PURGQ9UJV8 347 aaKnown RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 STRCP1A6NGW2 1772 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 ABLIM3O94929 683 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 PRPS1L1P21108 318 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 SSTR4P31391 388 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 CCR1P32246 355 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 EPHX2P34913 555 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 CCR6P51684 374 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 TMPRSS7Q7RTY8 843 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 NUP54Q7Z3B4 507 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 UBA3Q8TBC4 463 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 KIF12Q96FN5 646 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 CHRDQ9H2X0 955 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 AKT3Q9Y243 479 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 TMEM218A2RU14 115 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 GPR171O14626 319 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 SIX6O95475 246 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 TAGLN2P37802 199 aaKnown RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 ARSDP51689 593 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 HTR4Q13639 388 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 ABCA11PQ4W5N1 156 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 HEPHL1Q6MZM0 1159 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 OVCH2Q7RTZ1 564 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 DENND1CQ8IV53 801 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 ARID1BQ8NFD5 2236 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 TMEM39BQ9GZU3 492 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 BABAM2Q9NXR7 383 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 SNX10Q9Y5X0 201 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 CCDC163A0A0D9SF12 145 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms