RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 ATP1B1P05026 303 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 HMGN2P05204 90 aaKnown RBP8.35□□□□□ -1.07
CCDC47-207ENST00000612558 FABP3P05413 133 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 RPSAP08865 295 aaKnown RBP8.35□□□□□ -1.07
CCDC47-207ENST00000612558 IFI6P09912 130 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 FBXO45P0C2W1 286 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 OR12D1P0DN82 309 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 UQCRBP14927 111 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 ZNF23P17027 643 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 PTGER1P34995 402 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 KHKP50053 298 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 CLCN2P51788 898 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 GNA13Q14344 377 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 LASP1Q14847 261 aaKnown RBP8.35□□□□□ -1.07
CCDC47-207ENST00000612558 LTB4RQ15722 352 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 NRF1Q16656 503 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 PERM1Q5SV97 790 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 VTCN1Q7Z7D3 282 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 ZDHHC21Q8IVQ6 265 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 ZNF595Q8IYB9 648 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 GPR135Q8IZ08 494 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 OR2L13Q8N349 312 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 Q8N3U1 123 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 CBR4Q8N4T8 237 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 TMEM52Q8NDY8 209 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 OR10Q1Q8NGQ4 319 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 XAGE5Q8WWM1 108 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 KAT2AQ92830 837 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 ANKRD9Q96BM1 317 aaPredicted RBP8.35□□□□□ -1.07
CCDC47-207ENST00000612558 MVB12AQ96EY5 273 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 MMABQ96EY8 250 aaPredicted RBP8.35□□□□□ -1.07
CCDC47-207ENST00000612558 TMEM19Q96HH6 336 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 DPYSL5Q9BPU6 564 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 NUDT22Q9BRQ3 303 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 NTN4Q9HB63 628 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 CUTCQ9NTM9 273 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 DDX18Q9NVP1 670 aaKnown RBP8.35□□□□□ -1.07
CCDC47-207ENST00000612558 PTGFRNQ9P2B2 879 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 TRPC4Q9UBN4 977 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 ZNF639Q9UID6 485 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 GMEB2Q9UKD1 530 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 BAG5Q9UL15 447 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 RAB26Q9ULW5 256 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 CCDC88CQ9P219 2028 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 NINQ8N4C6 2090 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 A0A087WV62 115 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 DUXAA6NLW8 204 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 TMEM229AB2RXF0 380 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 PDLIM1O00151 329 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 CLDN4O14493 209 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 SOCS2O14508 198 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 ASNA1O43681 348 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 CTNSO60931 367 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 RASAL1O95294 804 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 PGM3O95394 542 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 BCHEP06276 602 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 ANKRD34CP0C6C1 535 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 SLC35E2P0CK97 266 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 CKMT1AP12532 417 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 BMP4P12644 408 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 FOLR1P15328 257 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 ITGA1P56199 1179 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 KCNJ10P78508 379 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 CCL7P80098 99 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 MRPS35P82673 323 aaKnown RBP8.35□□□□□ -1.07
CCDC47-207ENST00000612558 ID2Q02363 134 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 MED21Q13503 144 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 COL9A2Q14055 689 aaPredicted RBP8.35□□□□□ -1.07
CCDC47-207ENST00000612558 LPAL2Q16609 132 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 ZNF628Q5EBL2 1059 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 YOD1Q5VVQ6 348 aaPredicted RBP8.35□□□□□ -1.07
CCDC47-207ENST00000612558 TLDC1Q6P9B6 456 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 ZNF574Q6ZN55 896 aaPredicted RBP8.35□□□□□ -1.07
CCDC47-207ENST00000612558 PIWIL3Q7Z3Z3 882 aaKnown RBP8.35□□□□□ -1.07
CCDC47-207ENST00000612558 EPHX4Q8IUS5 362 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 SLC44A2Q8IWA5 706 aaPredicted RBP8.35□□□□□ -1.07
CCDC47-207ENST00000612558 LGI4Q8N135 537 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 SVOPLQ8N434 492 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 OR7G2Q8NG99 324 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 OR4D9Q8NGE8 314 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 OR5D16Q8NGK9 328 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 OR2I1PQ8NGU4 316 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 OR1L3Q8NH93 324 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 TMBIM1Q969X1 311 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 TAMM41Q96BW9 452 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 C16orf58Q96GQ5 468 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 PEX11GQ96HA9 241 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 ZNF597Q96LX8 424 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 MS4A4EQ96PG1 132 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 ZNF607Q96SK3 696 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 GTPBP2Q9BX10 602 aaKnown RBP8.35□□□□□ -1.07
CCDC47-207ENST00000612558 ACTRT3Q9BYD9 372 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 LRRN3Q9H3W5 708 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 Q9H521 79 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 FANCEQ9HB96 536 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 HCN3Q9P1Z3 774 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 PDP2Q9P2J9 529 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 RAB23Q9ULC3 237 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 ATXN7L1Q9ULK2 861 aaPredicted RBP8.35□□□□□ -1.07
CCDC47-207ENST00000612558 CDC14AQ9UNH5 594 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms