RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 CRB3Q9BUF7 120 aa16.39■□□□□ 0.21
SREK1-216ENST00000612404 CNPPD1Q9BV87 410 aa16.39■□□□□ 0.21
SREK1-216ENST00000612404 C3orf18Q9UK00 162 aa16.39■□□□□ 0.21
SREK1-216ENST00000612404 C19orf53Q9UNZ5 99 aaPredicted RBP16.39■□□□□ 0.21
SREK1-216ENST00000612404 A0A087WV62 115 aa16.38■□□□□ 0.21
SREK1-216ENST00000612404 C17orf105B2RV13 164 aa16.38■□□□□ 0.21
SREK1-216ENST00000612404 ACOT8O14734 319 aa16.38■□□□□ 0.21
SREK1-216ENST00000612404 GMNNO75496 209 aa16.38■□□□□ 0.21
SREK1-216ENST00000612404 SLC5A2P31639 672 aa16.38■□□□□ 0.21
SREK1-216ENST00000612404 EMP2P54851 167 aa16.38■□□□□ 0.21
SREK1-216ENST00000612404 DSTNP60981 165 aa16.38■□□□□ 0.21
SREK1-216ENST00000612404 GABREP78334 506 aa16.38■□□□□ 0.21
SREK1-216ENST00000612404 CYP2R1Q6VVX0 501 aa16.38■□□□□ 0.21
SREK1-216ENST00000612404 ZNF517Q6ZMY9 492 aaPredicted RBP16.38■□□□□ 0.21
SREK1-216ENST00000612404 TIPARPQ7Z3E1 657 aaKnown RBP16.38■□□□□ 0.21
SREK1-216ENST00000612404 DHFR2Q86XF0 187 aa16.38■□□□□ 0.21
SREK1-216ENST00000612404 ZZZ3Q8IYH5 903 aa16.38■□□□□ 0.21
SREK1-216ENST00000612404 C7orf57Q8NEG2 295 aa16.38■□□□□ 0.21
SREK1-216ENST00000612404 BHLHE22Q8NFJ8 381 aaPredicted RBP16.38■□□□□ 0.21
SREK1-216ENST00000612404 METTL21AQ8WXB1 218 aa16.38■□□□□ 0.21
SREK1-216ENST00000612404 FIG4Q92562 907 aa16.38■□□□□ 0.21
SREK1-216ENST00000612404 C16orf58Q96GQ5 468 aa16.38■□□□□ 0.21
SREK1-216ENST00000612404 OR51I1Q9H343 314 aa16.38■□□□□ 0.21
SREK1-216ENST00000612404 WDR54Q9H977 334 aa16.38■□□□□ 0.21
SREK1-216ENST00000612404 DLL3Q9NYJ7 618 aa16.38■□□□□ 0.21
SREK1-216ENST00000612404 NTMQ9P121 344 aa16.38■□□□□ 0.21
SREK1-216ENST00000612404 BCAP29Q9UHQ4 241 aa16.38■□□□□ 0.21
SREK1-216ENST00000612404 NXT1Q9UKK6 140 aaKnown RBP16.38■□□□□ 0.21
SREK1-216ENST00000612404 SNX13Q9Y5W8 968 aa16.38■□□□□ 0.21
SREK1-216ENST00000612404 CLCA3PQ9Y6N3 262 aa16.38■□□□□ 0.21
SREK1-216ENST00000612404 HRKO00198 91 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 ARPC2O15144 300 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 DYRK3O43781 588 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 ENTPD5O75356 428 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 BCAS2O75934 225 aaPredicted RBP16.37■□□□□ 0.21
SREK1-216ENST00000612404 DLGAP3O95886 979 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 TRAP1Q12931 704 aaKnown RBP16.37■□□□□ 0.21
SREK1-216ENST00000612404 NCF4Q15080 339 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 ADRM1Q16186 407 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 GCNT6Q5T4J0 391 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 WDR53Q7Z5U6 358 aaPredicted RBP16.37■□□□□ 0.21
SREK1-216ENST00000612404 PTRH1Q86Y79 214 aaKnown RBP16.37■□□□□ 0.21
SREK1-216ENST00000612404 PTOV1Q86YD1 416 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 OR5D16Q8NGK9 328 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 RAB8BQ92930 207 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 NCLNQ969V3 563 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 LRGUKQ96M69 825 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 SPATA9Q9BWV2 254 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 SERHL2Q9H4I8 314 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 POLR1BQ9H9Y6 1135 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 ERVK-19Q9WJR5 959 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 PCDHGA8Q9Y5G5 932 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 AHCTF1Q8WYP5 2266 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 ALOX12BO75342 701 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 TNFRSF21O75509 655 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 SSTR4P31391 388 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 GALNSP34059 522 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 KHKP50053 298 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 ACTR3P61158 418 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 ELAVL1Q15717 326 aaKnown RBP16.37■□□□□ 0.21
SREK1-216ENST00000612404 FAM69BQ5VUD6 431 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 GLYATQ6IB77 296 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 OR52R1Q8NGF1 315 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 PTPMT1Q8WUK0 201 aaPredicted RBP16.37■□□□□ 0.21
SREK1-216ENST00000612404 ACTRT3Q9BYD9 372 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 ACTR3BQ9P1U1 418 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 MAGEL2Q9UJ55 1249 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 SDK2Q58EX2 2172 aa16.37■□□□□ 0.21
SREK1-216ENST00000612404 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 HMGN4O00479 90 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 CBX7O95931 251 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 OR12D1P0DN82 309 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 ANXA11P50995 505 aaKnown RBP16.36■□□□□ 0.21
SREK1-216ENST00000612404 VMACQ2NL98 169 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 MFSD12Q6NUT3 480 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 ERICH5Q6P6B1 374 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 C11orf65Q8NCR3 313 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 XAGE5Q8WWM1 108 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 GIMAP5Q96F15 307 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 SPRY4Q9C004 299 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 MUC13Q9H3R2 512 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 PTRH2Q9Y3E5 179 aaKnown RBP16.36■□□□□ 0.21
SREK1-216ENST00000612404 PTPRBP23467 1997 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 DCDC2BA2VCK2 349 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 CXCR6O00574 342 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 IFI6P09912 130 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 GGT1P19440 569 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 ATP6V1B2P21281 511 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 S1PR1P21453 382 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 SPATA24Q86W54 205 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 PROSER1Q86XN7 944 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 SPPL2CQ8IUH8 684 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 SLC44A2Q8IWA5 706 aaPredicted RBP16.36■□□□□ 0.21
SREK1-216ENST00000612404 ENDOVQ8N8Q3 282 aaKnown RBP16.36■□□□□ 0.21
SREK1-216ENST00000612404 SLC9A6Q92581 669 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 ZNF578Q96N58 590 aaPredicted RBP16.36■□□□□ 0.21
SREK1-216ENST00000612404 OR8D2Q9GZM6 311 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 ZNF639Q9UID6 485 aa16.36■□□□□ 0.21
SREK1-216ENST00000612404 SYNDIG1LA6NDD5 238 aa16.35■□□□□ 0.21
SREK1-216ENST00000612404 COQ9O75208 318 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms