RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 KCNK6Q9Y257 313 aa13.28□□□□□ -0.28
COL6A1-207ENST00000612273 PLXNB3Q9ULL4 1909 aa13.27□□□□□ -0.28
COL6A1-207ENST00000612273 ZNF670-ZNF695F2Z2N8 137 aa13.27□□□□□ -0.28
COL6A1-207ENST00000612273 PGRMC2O15173 223 aa13.27□□□□□ -0.28
COL6A1-207ENST00000612273 HPGDSO60760 199 aa13.27□□□□□ -0.28
COL6A1-207ENST00000612273 NR2F6P10588 404 aa13.27□□□□□ -0.28
COL6A1-207ENST00000612273 ACP5P13686 325 aa13.27□□□□□ -0.28
COL6A1-207ENST00000612273 IL18Q14116 193 aa13.27□□□□□ -0.28
COL6A1-207ENST00000612273 NCF4Q15080 339 aa13.27□□□□□ -0.28
COL6A1-207ENST00000612273 NDUFAF5Q5TEU4 345 aa13.27□□□□□ -0.28
COL6A1-207ENST00000612273 SLX4IPQ5VYV7 408 aa13.27□□□□□ -0.28
COL6A1-207ENST00000612273 SYCE2Q6PIF2 218 aa13.27□□□□□ -0.28
COL6A1-207ENST00000612273 UNC5DQ6UXZ4 953 aa13.27□□□□□ -0.28
COL6A1-207ENST00000612273 AMZ2Q86W34 360 aa13.27□□□□□ -0.28
COL6A1-207ENST00000612273 NANOGP1Q8N7R0 232 aa13.27□□□□□ -0.28
COL6A1-207ENST00000612273 SMAP2Q8WU79 429 aaPredicted RBP13.27□□□□□ -0.28
COL6A1-207ENST00000612273 CHAC2Q8WUX2 184 aa13.27□□□□□ -0.28
COL6A1-207ENST00000612273 SLC35G5Q96KT7 338 aa13.27□□□□□ -0.28
COL6A1-207ENST00000612273 DPH7Q9BTV6 452 aa13.27□□□□□ -0.28
COL6A1-207ENST00000612273 SRRQ9GZT4 340 aa13.27□□□□□ -0.28
COL6A1-207ENST00000612273 CXXC1Q9P0U4 656 aaPredicted RBP13.27□□□□□ -0.28
COL6A1-207ENST00000612273 HCN2Q9UL51 889 aa13.27□□□□□ -0.28
COL6A1-207ENST00000612273 MGAT4BQ9UQ53 548 aa13.27□□□□□ -0.28
COL6A1-207ENST00000612273 CACNA1CQ13936 2221 aa13.27□□□□□ -0.28
COL6A1-207ENST00000612273 ZC3H12DA2A288 527 aaKnown RBP13.27□□□□□ -0.29
COL6A1-207ENST00000612273 OR52A4PA6NMU1 304 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 HOXC11O43248 304 aaPredicted RBP13.27□□□□□ -0.29
COL6A1-207ENST00000612273 HRO43593 1189 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 DPM1O60762 260 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 SLC2A10O95528 541 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 LALBAP00709 142 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 HMGN2P05204 90 aaKnown RBP13.27□□□□□ -0.29
COL6A1-207ENST00000612273 CSF3P09919 207 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 CCNYL3P0C7X3 344 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 MSL3P1P0C860 447 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 INPP1P49441 399 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 C21orf58P58505 322 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 TAS2R41P59536 307 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 NOGQ13253 232 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 GPR50Q13585 617 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 DHCR24Q15392 516 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 SLC35F1Q5T1Q4 408 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 C9orf64Q5T6V5 341 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 MFSD4BQ5TF39 518 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 IL20RBQ6UXL0 311 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 ASCC1Q8N9N2 400 aaKnown RBP13.27□□□□□ -0.29
COL6A1-207ENST00000612273 CXorf40BQ96DE9 158 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 ZNF354BQ96LW1 612 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 ZNF582Q96NG8 517 aaPredicted RBP13.27□□□□□ -0.29
COL6A1-207ENST00000612273 FCRL4Q96PJ5 515 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 AIF1LQ9BQI0 150 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 SIRT3Q9NTG7 399 aaPredicted RBP13.27□□□□□ -0.29
COL6A1-207ENST00000612273 ENOPH1Q9UHY7 261 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 SLC13A4Q9UKG4 626 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 A4GNTQ9UNA3 340 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 CSNK1G3Q9Y6M4 447 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 DOCK9Q9BZ29 2069 aa13.27□□□□□ -0.29
COL6A1-207ENST00000612273 EPCAMP16422 314 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 MYL9P24844 172 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 RPL3P39023 403 aaKnown RBP13.26□□□□□ -0.29
COL6A1-207ENST00000612273 KCNJ5P48544 419 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 DCDC1P59894 354 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 WDR5P61964 334 aaKnown RBP13.26□□□□□ -0.29
COL6A1-207ENST00000612273 CCDC149Q6ZUS6 474 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 ASB18Q6ZVZ8 466 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 VRK2Q86Y07 508 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 OR5P2Q8WZ92 322 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 NEURL3Q96EH8 262 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 FERD3LQ96RJ6 166 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 GLIPR2Q9H4G4 154 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 MAPRE3Q9UPY8 281 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 LSM2Q9Y333 95 aaKnown RBP13.26□□□□□ -0.29
COL6A1-207ENST00000612273 A3GALT2U3KPV4 340 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 CNTRLQ7Z7A1 2325 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 ANKRD34BA5PLL1 514 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 OTOL1A6NHN0 477 aaPredicted RBP13.26□□□□□ -0.29
COL6A1-207ENST00000612273 ERI3O43414 337 aaKnown RBP13.26□□□□□ -0.29
COL6A1-207ENST00000612273 IFI30P13284 250 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 FUT1P19526 365 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 PPP2R1BP30154 601 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 RHAGQ02094 409 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 ZNF33BQ06732 778 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 CAMK1Q14012 370 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 ZNF57Q68EA5 555 aaPredicted RBP13.26□□□□□ -0.29
COL6A1-207ENST00000612273 ZNF730Q6ZMV8 503 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 CCDC80Q76M96 950 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 FLCNQ8NFG4 579 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 BBS1Q8NFJ9 593 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 ZNF296Q8WUU4 475 aaPredicted RBP13.26□□□□□ -0.29
COL6A1-207ENST00000612273 VWCEQ96DN2 955 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 ZBED6CLQ96FA7 236 aaPredicted RBP13.26□□□□□ -0.29
COL6A1-207ENST00000612273 KCTD7Q96MP8 289 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 TEFMQ96QE5 360 aaKnown RBP13.26□□□□□ -0.29
COL6A1-207ENST00000612273 ZCCHC2Q9C0B9 1178 aaKnown RBP13.26□□□□□ -0.29
COL6A1-207ENST00000612273 NDRG2Q9UN36 371 aaKnown RBP13.26□□□□□ -0.29
COL6A1-207ENST00000612273 CLCA2Q9UQC9 943 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 GPR55Q9Y2T6 319 aaPredicted RBP13.26□□□□□ -0.29
COL6A1-207ENST00000612273 PLEKHM1Q9Y4G2 1056 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 REV3LO60673 3130 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 HYKKA2RU49 373 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms