RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 SLC28A2O43868 658 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 HLA-DQB1P01920 261 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 LIMS3P0CW19 117 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 LIMS4P0CW20 117 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 ARSBP15848 533 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 SELPP16109 830 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 VIPR1P32241 457 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 EFNB1P98172 346 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 TAP2Q03519 686 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 LRRC32Q14392 662 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 KLHL22Q53GT1 634 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 WDR45BQ5MNZ6 344 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 NXPE4Q6UWF7 544 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 B3GLCTQ6Y288 498 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 GAREM2Q75VX8 874 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 SZRD1Q7Z422 152 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 CRIPAKQ8N1N5 446 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 OR5D16Q8NGK9 328 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 ANGPTL6Q8NI99 470 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 SLC5A11Q8WWX8 675 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 UFD1Q92890 307 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 UCN3Q969E3 161 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 MAP6Q96JE9 813 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 ATF6BQ99941 703 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 TREX2Q9BQ50 279 aaPredicted RBP16.01■□□□□ 0.15
TNIP1-220ENST00000610535 TMEM43Q9BTV4 400 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 KCNK12Q9HB15 430 aa16.01■□□□□ 0.15
TNIP1-220ENST00000610535 THSD7BQ9C0I4 1608 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 PITPNM1O00562 1244 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 PROM1O43490 865 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 EFEMP2O95967 443 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 PRLHRP49683 370 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 EPHB3P54753 998 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 CLDN20P56880 219 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 RRAS2P62070 204 aaPredicted RBP16■□□□□ 0.15
TNIP1-220ENST00000610535 MAP4K2Q12851 820 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 MPP7Q5T2T1 576 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 HTR3DQ70Z44 454 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 AMIGO1Q86WK6 493 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 KIF18BQ86Y91 864 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 TRAM1L1Q8N609 369 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 XAGE5Q8WWM1 108 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 GLYATL1Q969I3 302 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 ZC3HAV1LQ96H79 300 aaKnown RBP16■□□□□ 0.15
TNIP1-220ENST00000610535 IGSF21Q96ID5 467 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 IL17FQ96PD4 163 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 FNDC11Q9BVV2 318 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 MRPL9Q9BYD2 267 aaKnown RBP16■□□□□ 0.15
TNIP1-220ENST00000610535 MKRN2Q9H000 416 aaKnown RBP16■□□□□ 0.15
TNIP1-220ENST00000610535 SERHL2Q9H4I8 314 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 ACAD8Q9UKU7 415 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 ICKQ9UPZ9 632 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 PCDHGB7Q9Y5F8 929 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 C2orf92A0A1B0GVN3 265 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 DVL2O14641 736 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 NTN1O95631 604 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 AGFG1P52594 562 aaKnown RBP16■□□□□ 0.15
TNIP1-220ENST00000610535 PNLIPRP1P54315 467 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 CDK5Q00535 292 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 NOGQ13253 232 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 WDR34Q96EX3 536 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 MARVELD1Q9BSK0 173 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 MAN2C1Q9NTJ4 1040 aa16■□□□□ 0.15
TNIP1-220ENST00000610535 LEFTY1O75610 366 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 ALDH1A1P00352 501 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 ACP2P11117 423 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 GABRA5P31644 462 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 MAPK12P53778 367 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 DEFB115Q30KQ5 88 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 ARSIQ5FYB1 569 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 TPGS2Q68CL5 300 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 ZNF57Q68EA5 555 aaPredicted RBP15.99■□□□□ 0.15
TNIP1-220ENST00000610535 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.99■□□□□ 0.154e-7■■■■□ 20.7
TNIP1-220ENST00000610535 SLC9B2Q86UD5 537 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 CCDC28AQ8IWP9 274 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 EXOSC8Q96B26 276 aaKnown RBP15.99■□□□□ 0.15
TNIP1-220ENST00000610535 COQ7Q99807 217 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 SGPP1Q9BX95 441 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 SLC25A13Q9UJS0 675 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 TMEM129A0AVI4 362 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 SOD1P00441 154 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 ZNF30P17039 623 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 POU3F3P20264 500 aaPredicted RBP15.99■□□□□ 0.15
TNIP1-220ENST00000610535 PTGER1P34995 402 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 MTNR1AP48039 350 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 INPP1P49441 399 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 ALDH6A1Q02252 535 aaKnown RBP15.99■□□□□ 0.15
TNIP1-220ENST00000610535 ZNF284Q2VY69 593 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 SPOUT1Q5T280 376 aaKnown RBP15.99■□□□□ 0.15
TNIP1-220ENST00000610535 TMEM25Q86YD3 366 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 CPXM2Q8N436 756 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 SLC37A3Q8NCC5 494 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 SORCS1Q8WY21 1168 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 TIFAQ96CG3 184 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 F2RL3Q96RI0 385 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 ARHGAP9Q9BRR9 750 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 ZSCAN5AQ9BUG6 496 aa15.99■□□□□ 0.15
TNIP1-220ENST00000610535 GTPBP2Q9BX10 602 aaKnown RBP15.99■□□□□ 0.15
TNIP1-220ENST00000610535 MRPL17Q9NRX2 175 aaKnown RBP15.99■□□□□ 0.15
TNIP1-220ENST00000610535 SIRT3Q9NTG7 399 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms