RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 HAGHQ16775 308 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 TCHHL1Q5QJ38 904 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 WDR25Q64LD2 544 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 OR6B2Q6IFH4 312 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 CWC27Q6UX04 472 aaKnown RBP3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 MFSD7Q6UXD7 560 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 YRDCQ86U90 279 aaKnown RBP3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 COLGALT1Q8NBJ5 622 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 ZNF540Q8NDQ6 660 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 OR4Q3Q8NH05 313 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 ITFG2Q969R8 447 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 TMEM186Q96B77 213 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 NSMCE2Q96MF7 247 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 ACCSQ96QU6 501 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 RAB11FIP5Q9BXF6 653 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 FTHL17Q9BXU8 183 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 SIRPDQ9H106 197 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 Q9HAA7 133 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 ELL3Q9HB65 397 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 SEC14L4Q9UDX3 406 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 TUBGCP4Q9UGJ1 667 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 ATG4BQ9Y4P1 393 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 PIK3R4Q99570 1358 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 TP53BP1Q12888 1972 aaPredicted RBP3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 K7ERI5 159 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 GALR3O60755 368 aaPredicted RBP3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 SEMA4FO95754 770 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 MT-ND1P03886 318 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 PROS1P07225 676 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 FCGR3AP08637 254 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 ACADSP16219 412 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 PPP2R1BP30154 601 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 NPY2RP49146 381 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 NME3Q13232 169 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 CCL14Q16627 93 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 HKDC1Q2TB90 917 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 REP15Q6BDI9 236 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 ARMCX5Q6P1M9 558 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 NEK5Q6P3R8 708 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 LRRC49Q8IUZ0 686 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 LRRC17Q8N6Y2 441 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 MLKLQ8NB16 471 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 CSNK1G2-AS1Q8NCQ2 148 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 BEST4Q8NFU0 473 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 OR2L2Q8NH16 312 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 BRSK1Q8TDC3 778 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 FAM222BQ8WU58 562 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 TMEM37Q8WXS4 190 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 TOMM40LQ969M1 308 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 TMEM45BQ96B21 275 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 DEFB118Q96PH6 123 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 CBWD1Q9BRT8 395 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 NACA2Q9H009 215 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 IL1RL2Q9HB29 575 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 HPF1Q9NWY4 346 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 PCSK1NQ9UHG2 260 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 CTNNA3Q9UI47 895 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 LAMP5Q9UJQ1 280 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 DUSP12Q9UNI6 340 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 SLC9A8Q9Y2E8 581 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 MRPL11Q9Y3B7 192 aaKnown RBP3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 FAM205AQ6ZU69 1335 aa3.42□□□□□ -1.86
SMCHD1-213ENST00000609587 SYNJ2BP-COX16A0A087WUM0 186 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 KRT87PA6NCN2 255 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 CFLARO15519 480 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 MT-ATP6P00846 226 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 GZMAP12544 262 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 HSD17B1P14061 328 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 ETS1P14921 441 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 GATA1P15976 413 aaPredicted RBP3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 GAP43P17677 238 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 TMOD1P28289 359 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 TRIM23P36406 574 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 MATKP42679 507 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 NUMBP49757 651 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 PGFP49763 221 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 SLC8A3P57103 927 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 GAMTQ14353 236 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 PCK2Q16822 640 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 ANKRD55Q3KP44 614 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 ZNF506Q5JVG8 444 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 LEMD1Q68G75 181 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 ADGRD2Q7Z7M1 963 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 LUZP1Q86V48 1076 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 TBC1D21Q8IYX1 336 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 PYROXD2Q8N2H3 581 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 HDDC3Q8N4P3 179 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 POM121L12Q8N7R1 296 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 U2AF1L4Q8WU68 220 aaKnown RBP3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 PHYHIPQ92561 330 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 ZNF75CPQ92670 426 aaPredicted RBP3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 FAM210AQ96ND0 272 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 NLNQ9BYT8 704 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 PUS3Q9BZE2 481 aaKnown RBP3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 FANCFQ9NPI8 374 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 SPASTQ9UBP0 616 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 LHX3Q9UBR4 397 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 IKZF3Q9UKT9 509 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 NUDCQ9Y266 331 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms