RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 SLC25A35Q3KQZ1 300 aa17.73■□□□□ 0.43
SGMS1-208ENST00000608287 CYP4Z2PQ8N1L4 340 aa17.73■□□□□ 0.43
SGMS1-208ENST00000608287 OR4K14Q8NGD5 310 aa17.73■□□□□ 0.43
SGMS1-208ENST00000608287 OR10Q1Q8NGQ4 319 aa17.73■□□□□ 0.43
SGMS1-208ENST00000608287 C16orf52Q8NHV5 167 aa17.73■□□□□ 0.43
SGMS1-208ENST00000608287 RIT1Q92963 219 aa17.73■□□□□ 0.43
SGMS1-208ENST00000608287 FBXL20Q96IG2 436 aa17.73■□□□□ 0.43
SGMS1-208ENST00000608287 FAM111AQ96PZ2 611 aa17.73■□□□□ 0.43
SGMS1-208ENST00000608287 SMC6Q96SB8 1091 aa17.73■□□□□ 0.43
SGMS1-208ENST00000608287 CNPPD1Q9BV87 410 aa17.73■□□□□ 0.43
SGMS1-208ENST00000608287 SHCBP1LQ9BZQ2 653 aa17.73■□□□□ 0.43
SGMS1-208ENST00000608287 MYOTQ9UBF9 498 aa17.73■□□□□ 0.43
SGMS1-208ENST00000608287 RAB21Q9UL25 225 aa17.73■□□□□ 0.43
SGMS1-208ENST00000608287 C1orf226A1L170 272 aa17.72■□□□□ 0.43
SGMS1-208ENST00000608287 H3BQF6 201 aa17.72■□□□□ 0.43
SGMS1-208ENST00000608287 HRKO00198 91 aa17.72■□□□□ 0.43
SGMS1-208ENST00000608287 SLC35E2P0CK97 266 aa17.72■□□□□ 0.43
SGMS1-208ENST00000608287 NUP107P57740 925 aa17.72■□□□□ 0.43
SGMS1-208ENST00000608287 ERVK-8P63133 956 aa17.72■□□□□ 0.43
SGMS1-208ENST00000608287 BTKQ06187 659 aa17.72■□□□□ 0.43
SGMS1-208ENST00000608287 KEAP1Q14145 624 aa17.72■□□□□ 0.43
SGMS1-208ENST00000608287 ZNF267Q14586 743 aaPredicted RBP17.72■□□□□ 0.43
SGMS1-208ENST00000608287 DEFB113Q30KQ7 82 aa17.72■□□□□ 0.43
SGMS1-208ENST00000608287 CXXC5Q7LFL8 322 aaKnown RBP17.72■□□□□ 0.43
SGMS1-208ENST00000608287 ZNF227Q86WZ6 799 aa17.72■□□□□ 0.43
SGMS1-208ENST00000608287 OR5L2Q8NGL0 311 aa17.72■□□□□ 0.43
SGMS1-208ENST00000608287 OR8K3Q8NH51 312 aa17.72■□□□□ 0.43
SGMS1-208ENST00000608287 ASB15Q8WXK1 588 aa17.72■□□□□ 0.43
SGMS1-208ENST00000608287 TM4SF18Q96CE8 201 aa17.72■□□□□ 0.43
SGMS1-208ENST00000608287 TMEM109Q9BVC6 243 aa17.72■□□□□ 0.43
SGMS1-208ENST00000608287 PLSCR2Q9NRY7 297 aa17.72■□□□□ 0.43
SGMS1-208ENST00000608287 SLC17A7Q9P2U7 560 aa17.72■□□□□ 0.43
SGMS1-208ENST00000608287 ERVK-11Q9UQG0 969 aa17.72■□□□□ 0.43
SGMS1-208ENST00000608287 ERVK-19Q9WJR5 959 aa17.72■□□□□ 0.43
SGMS1-208ENST00000608287 PCDHA9Q9Y5H5 950 aa17.72■□□□□ 0.43
SGMS1-208ENST00000608287 GNG14A0A1W2PPG7 69 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 A0A1W2PS29 197 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 A8MVJ9 347 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 ACOT7O00154 380 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 HS6ST1O60243 411 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 PCDH7O60245 1069 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 TRIM13O60858 407 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 IGKV3-11P04433 115 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 TUBBP07437 444 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 SERPINB3P29508 390 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 DEKP35659 375 aaKnown RBP17.71■□□□□ 0.43
SGMS1-208ENST00000608287 ALDH9A1P49189 494 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 XKP51811 444 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 TRA2BP62995 288 aaKnown RBP17.71■□□□□ 0.43
SGMS1-208ENST00000608287 ACSM2AQ08AH3 577 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 ASPHQ12797 758 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 IMPG1Q17R60 797 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 SPRED3Q2MJR0 410 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 KRT71Q3SY84 523 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 SPIN4Q56A73 249 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 SPDYAQ5MJ70 313 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 ACSM2BQ68CK6 577 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 Q71RC1 249 aaPredicted RBP17.71■□□□□ 0.43
SGMS1-208ENST00000608287 ARSGQ96EG1 525 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 APIPQ96GX9 242 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 RASL10BQ96S79 203 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 MDFIQ99750 246 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 FAIM2Q9BWQ8 316 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 GATA5Q9BWX5 397 aaPredicted RBP17.71■□□□□ 0.43
SGMS1-208ENST00000608287 LIME1Q9H400 295 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.71■□□□□ 0.43
SGMS1-208ENST00000608287 HPF1Q9NWY4 346 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 MCM8Q9UJA3 840 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 DNAJC13O75165 2243 aa17.71■□□□□ 0.43
SGMS1-208ENST00000608287 SERTM1A2A2V5 107 aa17.7■□□□□ 0.42
SGMS1-208ENST00000608287 OR14I1A6ND48 311 aa17.7■□□□□ 0.42
SGMS1-208ENST00000608287 BCKDKO14874 412 aa17.7■□□□□ 0.42
SGMS1-208ENST00000608287 ERAL1O75616 437 aaKnown RBP17.7■□□□□ 0.42
SGMS1-208ENST00000608287 ACVR2AP27037 513 aa17.7■□□□□ 0.42
SGMS1-208ENST00000608287 GALNSP34059 522 aa17.7■□□□□ 0.42
SGMS1-208ENST00000608287 RAE1P78406 368 aaKnown RBP17.7■□□□□ 0.42
SGMS1-208ENST00000608287 CMPK2Q5EBM0 449 aa17.7■□□□□ 0.42
SGMS1-208ENST00000608287 TMEM198Q66K66 360 aa17.7■□□□□ 0.42
SGMS1-208ENST00000608287 SLC48A1Q6P1K1 146 aa17.7■□□□□ 0.42
SGMS1-208ENST00000608287 IL20RBQ6UXL0 311 aa17.7■□□□□ 0.42
SGMS1-208ENST00000608287 RNF111Q6ZNA4 994 aa17.7■□□□□ 0.42
SGMS1-208ENST00000608287 CDC20BQ86Y33 519 aa17.7■□□□□ 0.42
SGMS1-208ENST00000608287 C9orf40Q8IXQ3 194 aa17.7■□□□□ 0.42
SGMS1-208ENST00000608287 ZFP62Q8NB50 900 aaPredicted RBP17.7■□□□□ 0.42
SGMS1-208ENST00000608287 TCP10LQ8TDR4 215 aa17.7■□□□□ 0.42
SGMS1-208ENST00000608287 NEUROD4Q9HD90 331 aa17.7■□□□□ 0.42
SGMS1-208ENST00000608287 TNFRSF12AQ9NP84 129 aa17.7■□□□□ 0.42
SGMS1-208ENST00000608287 B4GALT7Q9UBV7 327 aa17.7■□□□□ 0.42
SGMS1-208ENST00000608287 PSME2Q9UL46 239 aa17.7■□□□□ 0.42
SGMS1-208ENST00000608287 RTTNQ86VV8 2226 aa17.7■□□□□ 0.42
SGMS1-208ENST00000608287 GOLGA6L10A6NI86 522 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 A6NNC1 897 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 OR6B1O95007 311 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 UROSP10746 265 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 CPMP14384 443 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 CREB1P16220 341 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 PORP16435 677 aaPredicted RBP17.69■□□□□ 0.42
SGMS1-208ENST00000608287 NT5EP21589 574 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 ALDH3A1P30838 453 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 SOX3P41225 446 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms