RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 TRIM45Q9H8W5 580 aaPredicted RBP11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 MKKSQ9NPJ1 570 aaPredicted RBP11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 FSCN3Q9NQT6 498 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 IFT80Q9P2H3 777 aaPredicted RBP11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 GPC6Q9Y625 555 aaPredicted RBP11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 IGLV3-12A0A075B6K2 115 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 LNP1A1A4G5 178 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 DENRO43583 198 aaKnown RBP11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 LDB3O75112 727 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 DNAJB6O75190 326 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 LDOC1O95751 146 aaPredicted RBP11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 BCHEP06276 602 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CTSBP07858 339 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 UQCRBP14927 111 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SOX11P35716 441 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ZFP36L1Q07352 338 aaKnown RBP11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 MGAT2Q10469 447 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 STX4Q12846 297 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 KCNAB1Q14722 419 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 LASP1Q14847 261 aaKnown RBP11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 MAPK11Q15759 364 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ZNF750Q32MQ0 723 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 AMIGO2Q86SJ2 522 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 HIPK1Q86Z02 1210 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 EPHX4Q8IUS5 362 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 GALNT12Q8IXK2 581 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 VWA5B2Q8N398 1253 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CHDHQ8NE62 594 aaPredicted RBP11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 OR5K1Q8NHB7 308 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ADAMTS15Q8TE58 950 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 NR4A3Q92570 626 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SDCCAG3Q96C92 435 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 PEX11GQ96HA9 241 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CNDP2Q96KP4 475 aaKnown RBP11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 C7orf34Q96L11 122 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CCDC74BQ96LY2 380 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 OR7D2Q96RA2 312 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TREX2Q9BQ50 279 aaPredicted RBP11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 GTPBP2Q9BX10 602 aaKnown RBP11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 OSBPL11Q9BXB4 747 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 GABARAPL1Q9H0R8 117 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 PIGUQ9H490 435 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CXorf21Q9HAI6 301 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 NTN4Q9HB63 628 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ZNF304Q9HCX3 659 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 LANCL2Q9NS86 450 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 C14orf105Q9NVL8 296 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 USE1Q9NZ43 259 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 HCN3Q9P1Z3 774 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CLDN16Q9Y5I7 305 aa11.5□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 IGKV3D-11A0A0A0MRZ8 115 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 A8MVJ9 347 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TMEM229AB2RXF0 380 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TMX2-CTNND1H3BSU7 103 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 M0QX08 132 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SYT5O00445 386 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ADAMDEC1O15204 470 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ACOX3O15254 700 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SLC28A2O43868 658 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 OR10H2O60403 315 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TPST1O60507 370 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 FOXD2O60548 495 aaPredicted RBP11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 MFN2O95140 757 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 OR12D1P0DN82 309 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 NR2F1P10589 423 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 FGF5P12034 268 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 NT5EP21589 574 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 FBLP22087 321 aaKnown RBP11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CCKBRP32239 447 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SOX18P35713 384 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 XCR1P46094 333 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 AQP4P55087 323 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 PSPHP78330 225 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SLC13A2Q13183 592 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 LTB4RQ15722 352 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 RFX4Q33E94 735 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ARHGAP11BQ3KRB8 267 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 IQCCQ4KMZ1 466 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SFT2D3Q587I9 215 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SNAP47Q5SQN1 464 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 OR2T5Q6IEZ7 315 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 FAM111BQ6SJ93 734 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TTLL10Q6ZVT0 673 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TMPRSS9Q7Z410 1059 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SZRD1Q7Z422 152 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ZDHHC13Q8IUH4 622 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 OR7G1Q8NGA0 311 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 OR2T29Q8NH02 315 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 APOBEC4Q8WW27 367 aaKnown RBP11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 RBM18Q96H35 190 aaKnown RBP11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 DGAT2Q96PD7 388 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 NR1H4Q96RI1 486 aaPredicted RBP11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 EPYCQ99645 322 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CIB1Q99828 191 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 LMF2Q9BU23 707 aaKnown RBP11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SEMA6AQ9H2E6 1030 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TRPC4Q9UBN4 977 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 FTSJ1Q9UET6 329 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 RARRES3Q9UL19 164 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 OAZ3Q9UMX2 235 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms