RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 SEC22BO75396 215 aa20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 GLSO94925 669 aaPredicted RBP20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 PCSK2P16519 638 aa20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 DDCP20711 480 aa20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 GPX3P22352 226 aa20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 PTGS2P35354 604 aa20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 TMED10P49755 219 aaKnown RBP20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 KCNJ2P63252 427 aa20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 MRPS35P82673 323 aaKnown RBP20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 TRMT12Q53H54 448 aaKnown RBP20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 ARL13AQ5H913 290 aaPredicted RBP20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 PRAMEF20Q5VT98 475 aa20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 FGD2Q7Z6J4 655 aa20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 CHERPQ8IWX8 916 aaKnown RBP20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 FBXW8Q8N3Y1 598 aa20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 OR52R1Q8NGF1 315 aa20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 CCDC120Q96HB5 630 aa20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 METTL2AQ96IZ6 378 aaKnown RBP20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 BBS4Q96RK4 519 aa20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 MIEF1Q9NQG6 463 aa20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 TUBA8Q9NY65 449 aaPredicted RBP20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 PRODH2Q9UF12 536 aa20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 WBP11Q9Y2W2 641 aaKnown RBP20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 CCL27Q9Y4X3 112 aa20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 PTGDR2Q9Y5Y4 395 aa20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 CHCHD2Q9Y6H1 151 aaPredicted RBP20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 CENPEQ02224 2701 aa20.15■□□□□ 0.82
PPFIA3-208ENST00000602726 ZNF407Q9C0G0 2248 aa20.14■□□□□ 0.81
PPFIA3-208ENST00000602726 BCAS2O75934 225 aaPredicted RBP20.14■□□□□ 0.81
PPFIA3-208ENST00000602726 CBX7O95931 251 aa20.14■□□□□ 0.81
PPFIA3-208ENST00000602726 CHRNGP07510 517 aa20.14■□□□□ 0.81
PPFIA3-208ENST00000602726 MPIP34949 423 aa20.14■□□□□ 0.81
PPFIA3-208ENST00000602726 FOXO1Q12778 655 aa20.14■□□□□ 0.81
PPFIA3-208ENST00000602726 RPS6KA2Q15349 733 aa20.14■□□□□ 0.81
PPFIA3-208ENST00000602726 ZNF628Q5EBL2 1059 aa20.14■□□□□ 0.81
PPFIA3-208ENST00000602726 KANK2Q63ZY3 851 aa20.14■□□□□ 0.81
PPFIA3-208ENST00000602726 ARHGAP11AQ6P4F7 1023 aa20.14■□□□□ 0.81
PPFIA3-208ENST00000602726 FAM109AQ8N4B1 249 aa20.14■□□□□ 0.81
PPFIA3-208ENST00000602726 TMEM251Q8N6I4 163 aa20.14■□□□□ 0.81
PPFIA3-208ENST00000602726 OR9A2Q8NGT5 310 aa20.14■□□□□ 0.81
PPFIA3-208ENST00000602726 ZNF675Q8TD23 568 aa20.14■□□□□ 0.81
PPFIA3-208ENST00000602726 NXF5Q9H1B4 397 aaKnown RBP20.14■□□□□ 0.81
PPFIA3-208ENST00000602726 ZDHHC11Q9H8X9 412 aa20.14■□□□□ 0.81
PPFIA3-208ENST00000602726 LRTM1Q9HBL6 345 aa20.14■□□□□ 0.81
PPFIA3-208ENST00000602726 MYNNQ9NPC7 610 aa20.14■□□□□ 0.81
PPFIA3-208ENST00000602726 C1orf109Q9NX04 203 aa20.14■□□□□ 0.81
PPFIA3-208ENST00000602726 BOKQ9UMX3 212 aaPredicted RBP20.14■□□□□ 0.81
PPFIA3-208ENST00000602726 DTX4Q9Y2E6 619 aa20.14■□□□□ 0.81
PPFIA3-208ENST00000602726 TRAF6Q9Y4K3 522 aa20.14■□□□□ 0.81
PPFIA3-208ENST00000602726 DNAJC13O75165 2243 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 CYSRT1A8MQ03 144 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 TYROBPO43914 113 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 TPOP07202 933 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 FGF4P08620 206 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 NEFHP12036 1026 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 PRPH2P23942 346 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 SOX18P35713 384 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 FBXW4P57775 412 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 DUSP8Q13202 625 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 NNATQ16517 81 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 HYAL4Q2M3T9 481 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 FAM71E1Q6IPT2 247 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 RPTNQ6XPR3 784 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 ZCCHC23Q6ZST2 131 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 DOLPP1Q86YN1 238 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 TICAM1Q8IUC6 712 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 PRR22Q8IZ63 422 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 CLYBLQ8N0X4 340 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 SIMC1Q8NDZ2 872 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 DIO2Q92813 273 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 KAT2AQ92830 837 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 ERP27Q96DN0 273 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 LCORQ96JN0 433 aaPredicted RBP20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 ITPAQ9BY32 194 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 CENPHQ9H3R5 247 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 PLSCR2Q9NRY7 297 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 CNOT11Q9UKZ1 510 aaKnown RBP20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 DNAJC15Q9Y5T4 150 aa20.13■□□□□ 0.81
PPFIA3-208ENST00000602726 NINQ8N4C6 2090 aa20.12■□□□□ 0.81
PPFIA3-208ENST00000602726 UNC79Q9P2D8 2635 aa20.12■□□□□ 0.81
PPFIA3-208ENST00000602726 NPIPB8E9PQR5 432 aa20.12■□□□□ 0.81
PPFIA3-208ENST00000602726 CTIFO43310 598 aaKnown RBP20.12■□□□□ 0.81
PPFIA3-208ENST00000602726 LRATO95237 230 aa20.12■□□□□ 0.81
PPFIA3-208ENST00000602726 BPGMP07738 259 aa20.12■□□□□ 0.81
PPFIA3-208ENST00000602726 LINC00032P0C843 101 aa20.12■□□□□ 0.81
PPFIA3-208ENST00000602726 ABCD3P28288 659 aa20.12■□□□□ 0.81
PPFIA3-208ENST00000602726 SERPINB5P36952 375 aa20.12■□□□□ 0.81
PPFIA3-208ENST00000602726 MAGEA5P43359 124 aa20.12■□□□□ 0.81
PPFIA3-208ENST00000602726 DCAF7P61962 342 aa20.12■□□□□ 0.81
PPFIA3-208ENST00000602726 RPP38P78345 283 aaKnown RBP20.12■□□□□ 0.81
PPFIA3-208ENST00000602726 KIAA0040Q15053 153 aa20.12■□□□□ 0.81
PPFIA3-208ENST00000602726 CEBPEQ15744 281 aa20.12■□□□□ 0.81
PPFIA3-208ENST00000602726 TBCELQ5QJ74 424 aa20.12■□□□□ 0.81
PPFIA3-208ENST00000602726 RNF165Q6ZSG1 346 aa20.12■□□□□ 0.81
PPFIA3-208ENST00000602726 IKBIPQ70UQ0 350 aa20.12■□□□□ 0.81
PPFIA3-208ENST00000602726 MRGPRGQ86SM5 289 aa20.12■□□□□ 0.81
PPFIA3-208ENST00000602726 DDIASQ8IXT1 998 aa20.12■□□□□ 0.81
PPFIA3-208ENST00000602726 FAM9CQ8IZT9 166 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms