RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 FTSJ1Q9UET6 329 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 RARRES3Q9UL19 164 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 RP1P56715 2156 aa16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 SLC28A2O43868 658 aa16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 PDE9AO76083 593 aa16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 PGM3O95394 542 aa16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 AGR2O95994 175 aa16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 NR2F1P10589 423 aa16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 MAN2A2P49641 1150 aa16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 MAPK11Q15759 364 aa16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 TRMT12Q53H54 448 aaKnown RBP16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 MFSD12Q6NUT3 480 aa16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 BPHLQ86WA6 291 aaPredicted RBP16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 ICA1LQ8NDH6 482 aa16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 C7orf57Q8NEG2 295 aa16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 OR10Q1Q8NGQ4 319 aa16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 CTHRC1Q96CG8 243 aa16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 RBM18Q96H35 190 aaKnown RBP16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 TPD52L3Q96J77 140 aa16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 HSH2DQ96JZ2 352 aa16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 OR7D2Q96RA2 312 aa16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 YIPF2Q9BWQ6 316 aa16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 ALOXE3Q9BYJ1 711 aa16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 IL1RAPQ9NPH3 570 aa16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 EQTNQ9NQ60 294 aa16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 DNAJB9Q9UBS3 223 aa16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 MMACHCQ9Y4U1 282 aa16.52■□□□□ 0.24
SHKBP1-224ENST00000600718 USP34Q70CQ2 3546 aa16.52■□□□□ 0.23
SHKBP1-224ENST00000600718 UNC13CQ8NB66 2214 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 SEMG1P04279 462 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 FBLP22087 321 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 MAGEA2P43356 314 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 BTG2P78543 158 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 SERTAD2Q14140 314 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 SFT2D3Q587I9 215 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 RHBDD2Q6NTF9 364 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 CDC73Q6P1J9 531 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 ZCCHC12Q6PEW1 402 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 ZDHHC21Q8IVQ6 265 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 SLC44A2Q8IWA5 706 aaPredicted RBP16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 SUMF1Q8NBK3 374 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 TAMM41Q96BW9 452 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 PELOQ9BRX2 385 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 SLC7A5P2Q9GIP4 190 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 LANCL2Q9NS86 450 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 SIDT1Q9NXL6 827 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 LIPT1Q9Y234 373 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 ASXL3Q9C0F0 2248 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 MUC3AQ02505 3323 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 MAGEA13PA6NCF6 341 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 CDX4O14627 284 aaPredicted RBP16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 CDC123O75794 336 aaPredicted RBP16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 PRSS23O95084 383 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 CST1P01037 141 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 ZFP36L1Q07352 338 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 SF3A2Q15428 464 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 SYPL1Q16563 259 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 ATAD3BQ5T9A4 648 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 PRAMEF8Q5VWM4 474 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 PRAMEF7Q5VXH5 474 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 VTCN1Q7Z7D3 282 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 ADAMTS15Q8TE58 950 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 ATOH1Q92858 354 aaPredicted RBP16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 DGAT2Q96PD7 388 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 ZNF607Q96SK3 696 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 C9orf16Q9BUW7 83 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 COQ10BQ9H8M1 238 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 CXorf21Q9HAI6 301 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 BCL2L10Q9HD36 194 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 CLDN16Q9Y5I7 305 aa16.51■□□□□ 0.23
SHKBP1-224ENST00000600718 PRAMEF27A3QJZ7 478 aa16.5■□□□□ 0.23
SHKBP1-224ENST00000600718 TMEM229AB2RXF0 380 aa16.5■□□□□ 0.23
SHKBP1-224ENST00000600718 TGFBR3LH3BV60 316 aa16.5■□□□□ 0.23
SHKBP1-224ENST00000600718 CD59P13987 128 aa16.5■□□□□ 0.23
SHKBP1-224ENST00000600718 CSTF2P33240 577 aaKnown RBP eCLIP16.5■□□□□ 0.23
SHKBP1-224ENST00000600718 GALNSP34059 522 aa16.5■□□□□ 0.23
SHKBP1-224ENST00000600718 STT3AP46977 705 aa16.5■□□□□ 0.23
SHKBP1-224ENST00000600718 CRISP3P54108 245 aa16.5■□□□□ 0.23
SHKBP1-224ENST00000600718 KCNJ10P78508 379 aa16.5■□□□□ 0.23
SHKBP1-224ENST00000600718 ZBTB49Q6ZSB9 765 aa16.5■□□□□ 0.23
SHKBP1-224ENST00000600718 PIWIL3Q7Z3Z3 882 aaKnown RBP16.5■□□□□ 0.23
SHKBP1-224ENST00000600718 ARMC8Q8IUR7 673 aa16.5■□□□□ 0.23
SHKBP1-224ENST00000600718 BBS10Q8TAM1 723 aa16.5■□□□□ 0.23
SHKBP1-224ENST00000600718 RIT1Q92963 219 aa16.5■□□□□ 0.23
SHKBP1-224ENST00000600718 CIB1Q99828 191 aa16.5■□□□□ 0.23
SHKBP1-224ENST00000600718 FAM192AQ9GZU8 254 aa16.5■□□□□ 0.23
SHKBP1-224ENST00000600718 C8orf4Q9NR00 106 aa16.5■□□□□ 0.23
SHKBP1-224ENST00000600718 EXD2Q9NVH0 621 aa16.5■□□□□ 0.23
SHKBP1-224ENST00000600718 GIN1Q9NXP7 522 aa16.5■□□□□ 0.23
SHKBP1-224ENST00000600718 BAG5Q9UL15 447 aa16.5■□□□□ 0.23
SHKBP1-224ENST00000600718 ADAMTS20P59510 1910 aa16.5■□□□□ 0.23
SHKBP1-224ENST00000600718 H0YJX3 145 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 OPN1SWP03999 348 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 FABP3P05413 133 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 HBQ1P09105 142 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 CT62P0C5K7 136 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 ZNF26P17031 533 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 RPS26P11Q5JNZ5 115 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 ARHGAP40Q5TG30 622 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms