RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 MIER2Q8N344 545 aa17.93■□□□□ 0.46
UPF1-209ENST00000600310 ZADH2Q8N4Q0 377 aa17.93■□□□□ 0.46
UPF1-209ENST00000600310 RBMXL3Q8N7X1 1067 aaKnown RBP17.93■□□□□ 0.46
UPF1-209ENST00000600310 C16orf52Q8NHV5 167 aa17.93■□□□□ 0.46
UPF1-209ENST00000600310 SLC39A7Q92504 469 aa17.93■□□□□ 0.46
UPF1-209ENST00000600310 RILPQ96NA2 401 aa17.93■□□□□ 0.46
UPF1-209ENST00000600310 BBC3Q96PG8 261 aaPredicted RBP17.93■□□□□ 0.46
UPF1-209ENST00000600310 ZBTB18Q99592 522 aa17.93■□□□□ 0.46
UPF1-209ENST00000600310 TMEM120AQ9BXJ8 343 aa17.93■□□□□ 0.46
UPF1-209ENST00000600310 WWTR1Q9GZV5 400 aa17.93■□□□□ 0.46
UPF1-209ENST00000600310 ANKRA2Q9H9E1 313 aa17.93■□□□□ 0.46
UPF1-209ENST00000600310 LIN28AQ9H9Z2 209 aaKnown RBP17.93■□□□□ 0.46
UPF1-209ENST00000600310 PRODH2Q9UF12 536 aa17.93■□□□□ 0.46
UPF1-209ENST00000600310 C19orf53Q9UNZ5 99 aaPredicted RBP17.93■□□□□ 0.46
UPF1-209ENST00000600310 YARS2Q9Y2Z4 477 aaKnown RBP17.93■□□□□ 0.46
UPF1-209ENST00000600310 C2orf92A0A1B0GVN3 265 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 DYTNA2CJ06 578 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 WWP2O00308 870 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 UPK1AO00322 258 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 RNASET2O00584 256 aaKnown RBP17.92■□□□□ 0.46
UPF1-209ENST00000600310 SCN2BO60939 215 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 ITGA10O75578 1167 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 WDPCPO95876 746 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 GPX3P22352 226 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 LSP1P33241 339 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 S100A3P33764 101 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 GPC1P35052 558 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 EMDP50402 254 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 CDK9P50750 372 aaKnown RBP17.92■□□□□ 0.46
UPF1-209ENST00000600310 ATP4BP51164 291 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 STX1BP61266 288 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 FAM174BQ3ZCQ3 159 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 METTL21CQ5VZV1 264 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 C16orf47Q6ZP98 133 aaPredicted RBP17.92■□□□□ 0.46
UPF1-209ENST00000600310 OR2L13Q8N349 312 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 ZNF441Q8N8Z8 693 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 PSMA8Q8TAA3 256 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 ADIPOR1Q96A54 375 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 TP53INP1Q96A56 240 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 SIRT3Q9NTG7 399 aaPredicted RBP17.92■□□□□ 0.46
UPF1-209ENST00000600310 RYDENQ9NUL5 291 aaKnown RBP17.92■□□□□ 0.46
UPF1-209ENST00000600310 PLA2G3Q9NZ20 509 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 NTMQ9P121 344 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 KLHL14Q9P2G3 628 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 TRIM33Q9UPN9 1127 aa17.92■□□□□ 0.46
UPF1-209ENST00000600310 OR5H15A6NDH6 313 aa17.91■□□□□ 0.46
UPF1-209ENST00000600310 EIF4E1BA6NMX2 242 aaKnown RBP17.91■□□□□ 0.46
UPF1-209ENST00000600310 C9JVG2 144 aa17.91■□□□□ 0.46
UPF1-209ENST00000600310 COQ9O75208 318 aa17.91■□□□□ 0.46
UPF1-209ENST00000600310 OR2J2O76002 312 aa17.91■□□□□ 0.46
UPF1-209ENST00000600310 C6orf47O95873 294 aa17.91■□□□□ 0.46
UPF1-209ENST00000600310 TRHRP34981 398 aaPredicted RBP17.91■□□□□ 0.46
UPF1-209ENST00000600310 CD97P48960 835 aa17.91■□□□□ 0.46
UPF1-209ENST00000600310 ARFIP2P53365 341 aa17.91■□□□□ 0.46
UPF1-209ENST00000600310 SEC24CP53992 1094 aa17.91■□□□□ 0.46
UPF1-209ENST00000600310 GNGT1P63211 74 aa17.91■□□□□ 0.46
UPF1-209ENST00000600310 ARG2P78540 354 aa17.91■□□□□ 0.46
UPF1-209ENST00000600310 PIGGQ5H8A4 983 aa17.91■□□□□ 0.46
UPF1-209ENST00000600310 ANXA8L1Q5VT79 327 aa17.91■□□□□ 0.46
UPF1-209ENST00000600310 HLA-DQA1Q5Y7H0 255 aa17.91■□□□□ 0.46
UPF1-209ENST00000600310 PAOXQ6QHF9 649 aa17.91■□□□□ 0.46
UPF1-209ENST00000600310 C17orf47Q8NEP4 570 aa17.91■□□□□ 0.46
UPF1-209ENST00000600310 VPS37AQ8NEZ2 397 aa17.91■□□□□ 0.46
UPF1-209ENST00000600310 GAL3ST4Q96RP7 486 aa17.91■□□□□ 0.46
UPF1-209ENST00000600310 RASL10BQ96S79 203 aa17.91■□□□□ 0.46
UPF1-209ENST00000600310 TRIM45Q9H8W5 580 aaPredicted RBP17.91■□□□□ 0.46
UPF1-209ENST00000600310 DDX18Q9NVP1 670 aaKnown RBP17.91■□□□□ 0.46
UPF1-209ENST00000600310 FAM120CQ9NX05 1096 aaKnown RBP17.91■□□□□ 0.46
UPF1-209ENST00000600310 COPG1Q9Y678 874 aaKnown RBP17.91■□□□□ 0.46
UPF1-209ENST00000600310 PRSS51A0A1B0GVH4 220 aa17.9■□□□□ 0.46
UPF1-209ENST00000600310 PSMG1O95456 288 aa17.9■□□□□ 0.46
UPF1-209ENST00000600310 PGRP06401 933 aa17.9■□□□□ 0.46
UPF1-209ENST00000600310 CD96P40200 585 aa17.9■□□□□ 0.46
UPF1-209ENST00000600310 ZFP36L2P47974 494 aaKnown RBP17.9■□□□□ 0.46
UPF1-209ENST00000600310 SSR4P51571 173 aa17.9■□□□□ 0.46
UPF1-209ENST00000600310 DGKQP52824 942 aa17.9■□□□□ 0.46
UPF1-209ENST00000600310 TUBA3CQ13748 450 aa17.9■□□□□ 0.46
UPF1-209ENST00000600310 SQLEQ14534 574 aa17.9■□□□□ 0.46
UPF1-209ENST00000600310 TUBA3EQ6PEY2 450 aa17.9■□□□□ 0.46
UPF1-209ENST00000600310 Q6ZS92 163 aa17.9■□□□□ 0.46
UPF1-209ENST00000600310 SLC15A4Q8N697 577 aa17.9■□□□□ 0.46
UPF1-209ENST00000600310 OR9I1Q8NGQ6 314 aa17.9■□□□□ 0.46
UPF1-209ENST00000600310 MAGED4Q96JG8 741 aa17.9■□□□□ 0.46
UPF1-209ENST00000600310 UTP23Q9BRU9 249 aaKnown RBP17.9■□□□□ 0.46
UPF1-209ENST00000600310 C3orf14Q9HBI5 128 aa17.9■□□□□ 0.46
UPF1-209ENST00000600310 NEUROD4Q9HD90 331 aa17.9■□□□□ 0.46
UPF1-209ENST00000600310 TMEM45AQ9NWC5 275 aa17.9■□□□□ 0.46
UPF1-209ENST00000600310 TAS2R9Q9NYW1 312 aa17.9■□□□□ 0.46
UPF1-209ENST00000600310 DTX4Q9Y2E6 619 aa17.9■□□□□ 0.46
UPF1-209ENST00000600310 CSAG2Q9Y5P2 127 aa17.9■□□□□ 0.46
UPF1-209ENST00000600310 HEMK1Q9Y5R4 338 aaPredicted RBP17.9■□□□□ 0.46
UPF1-209ENST00000600310 FAM234BA2RU67 622 aa17.89■□□□□ 0.45
UPF1-209ENST00000600310 GMNCA6NCL1 334 aa17.89■□□□□ 0.45
UPF1-209ENST00000600310 CFLARO15519 480 aa17.89■□□□□ 0.45
UPF1-209ENST00000600310 EMC8O43402 210 aa17.89■□□□□ 0.45
UPF1-209ENST00000600310 ZNF354AO60765 605 aaPredicted RBP17.89■□□□□ 0.45
UPF1-209ENST00000600310 NADKO95544 446 aaPredicted RBP17.89■□□□□ 0.45
UPF1-209ENST00000600310 F10P00742 488 aa17.89■□□□□ 0.45
UPF1-209ENST00000600310 IL6P05231 212 aa17.89■□□□□ 0.45
UPF1-209ENST00000600310 DRD5P21918 477 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms