RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	GALNT12	Q8IXK2	581 aa		20.44	■□□□□ 0.86
LTBP4-227	ENST00000600026	ZNF675	Q8TD23	568 aa		20.44	■□□□□ 0.86
LTBP4-227	ENST00000600026	PTPMT1	Q8WUK0	201 aa	Predicted RBP	20.44	■□□□□ 0.86
LTBP4-227	ENST00000600026	DAZL	Q92904	295 aa	Known RBP	20.44	■□□□□ 0.86
LTBP4-227	ENST00000600026	RIT1	Q92963	219 aa		20.44	■□□□□ 0.86
LTBP4-227	ENST00000600026	THOC3	Q96J01	351 aa	Known RBP	20.44	■□□□□ 0.86
LTBP4-227	ENST00000600026	INPP5K	Q9BT40	448 aa		20.44	■□□□□ 0.86
LTBP4-227	ENST00000600026	C3orf14	Q9HBI5	128 aa		20.44	■□□□□ 0.86
LTBP4-227	ENST00000600026	SERHL	Q9NQF3	203 aa		20.44	■□□□□ 0.86
LTBP4-227	ENST00000600026	SNX8	Q9Y5X2	465 aa		20.44	■□□□□ 0.86
LTBP4-227	ENST00000600026	CLCA3P	Q9Y6N3	262 aa		20.44	■□□□□ 0.86
LTBP4-227	ENST00000600026	LOC400499	M0QZD8	3231 aa		20.44	■□□□□ 0.86
LTBP4-227	ENST00000600026	ITPR1	Q14643	2758 aa		20.43	■□□□□ 0.86
LTBP4-227	ENST00000600026		A6NL46	340 aa		20.43	■□□□□ 0.86
LTBP4-227	ENST00000600026	NPPA	P01160	153 aa		20.43	■□□□□ 0.86
LTBP4-227	ENST00000600026	IFI6	P09912	130 aa		20.43	■□□□□ 0.86
LTBP4-227	ENST00000600026	CDK9	P50750	372 aa	Known RBP	20.43	■□□□□ 0.86
LTBP4-227	ENST00000600026	SOX8	P57073	446 aa		20.43	■□□□□ 0.86
LTBP4-227	ENST00000600026	LTB4R	Q15722	352 aa		20.43	■□□□□ 0.86
LTBP4-227	ENST00000600026	TRMT5	Q32P41	509 aa	Known RBP	20.43	■□□□□ 0.86
LTBP4-227	ENST00000600026	B3GNT7	Q8NFL0	401 aa		20.43	■□□□□ 0.86
LTBP4-227	ENST00000600026	ADCY4	Q8NFM4	1077 aa		20.43	■□□□□ 0.86
LTBP4-227	ENST00000600026	PSMA8	Q8TAA3	256 aa		20.43	■□□□□ 0.86
LTBP4-227	ENST00000600026	M1AP	Q8TC57	530 aa		20.43	■□□□□ 0.86
LTBP4-227	ENST00000600026	DOK4	Q8TEW6	326 aa		20.43	■□□□□ 0.86
LTBP4-227	ENST00000600026	MOAP1	Q96BY2	351 aa		20.43	■□□□□ 0.86
LTBP4-227	ENST00000600026	ROPN1L	Q96C74	230 aa		20.43	■□□□□ 0.86
LTBP4-227	ENST00000600026	ART5	Q96L15	291 aa		20.43	■□□□□ 0.86
LTBP4-227	ENST00000600026	BBC3	Q96PG8	261 aa	Predicted RBP	20.43	■□□□□ 0.86
LTBP4-227	ENST00000600026	CXorf21	Q9HAI6	301 aa		20.43	■□□□□ 0.86
LTBP4-227	ENST00000600026	MMP25	Q9NPA2	562 aa		20.43	■□□□□ 0.86
LTBP4-227	ENST00000600026	PPIE	Q9UNP9	301 aa	Known RBP	20.43	■□□□□ 0.86
LTBP4-227	ENST00000600026	CPAMD8	Q8IZJ3	1885 aa		20.43	■□□□□ 0.86
LTBP4-227	ENST00000600026	CEACAM4	O75871	244 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	ATP5H	O75947	161 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	DDAH2	O95865	285 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	GSN	P06396	782 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	ZCCHC18	P0CG32	403 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	ITGAM	P11215	1152 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	ICAM2	P13598	275 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	UQCRC2	P22695	453 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	PTGER1	P34995	402 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	NUDT2	P50583	147 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	PGD	P52209	483 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	MAP4K2	Q12851	820 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	RAPSN	Q13702	412 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	SPRED3	Q2MJR0	410 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	PRICKLE4	Q2TBC4	344 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	ZNF628	Q5EBL2	1059 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	LRIF1	Q5T3J3	769 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	TMEM107	Q6UX40	140 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	MORN4	Q8NDC4	146 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	FDCSP	Q8NFU4	85 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	SLC2A12	Q8TD20	617 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	SFXN5	Q8TD22	340 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	KAT2A	Q92830	837 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	NCLN	Q969V3	563 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	ELP4	Q96EB1	424 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	ARHGAP9	Q9BRR9	750 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	LHPP	Q9H008	270 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	PAIP1	Q9H074	479 aa	Known RBP	20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	CXorf36	Q9H7Y0	433 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	IL1RL2	Q9HB29	575 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	NDE1	Q9NXR1	346 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	MAT2B	Q9NZL9	334 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	PTGFRN	Q9P2B2	879 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	MAP10	Q9P2G4	905 aa		20.42	■□□□□ 0.86
LTBP4-227	ENST00000600026	PLOD2	O00469	737 aa		20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	EMC8	O43402	210 aa		20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	HNRNPCL1	O60812	293 aa	Known RBP	20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	KRT16	P08779	473 aa		20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	T-ENOL	P0DO92	83 aa		20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	CDKN2C	P42773	168 aa		20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	CCT3	P49368	545 aa	Known RBP	20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	GPR143	P51810	404 aa		20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	AP2B1	P63010	937 aa		20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	PRR5	P85299	388 aa		20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	BNIP1	Q12981	228 aa		20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	ZNF267	Q14586	743 aa	Predicted RBP	20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	IRAK1BP1	Q5VVH5	260 aa		20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	BHLHB9	Q6PI77	547 aa		20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	FAM111B	Q6SJ93	734 aa		20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	HACD2	Q6Y1H2	254 aa		20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	TMEM64	Q6YI46	380 aa		20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	VWA5B2	Q8N398	1253 aa		20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	KIF2B	Q8N4N8	673 aa		20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	ZNF321P	Q8N8H1	164 aa		20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	APCDD1L	Q8NCL9	501 aa		20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	BRIX1	Q8TDN6	353 aa	Known RBP	20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	ELP5	Q8TE02	316 aa		20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	VMP1	Q96GC9	406 aa		20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	OR8D2	Q9GZM6	311 aa		20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	SIRT3	Q9NTG7	399 aa	Predicted RBP	20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	DDX18	Q9NVP1	670 aa	Known RBP	20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	GPR83	Q9NYM4	423 aa		20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026	TNRC6A	Q8NDV7	1962 aa	Known RBP	20.41	■□□□□ 0.86
LTBP4-227	ENST00000600026		A0A087WV62	115 aa		20.4	■□□□□ 0.86
LTBP4-227	ENST00000600026		B2RBV5	119 aa		20.4	■□□□□ 0.86

Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms