RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 ZNF267Q14586 743 aaPredicted RBP13.68□□□□□ -0.22
VRK3-212ENST00000596814 C1orf146Q5VVC0 180 aa13.68□□□□□ -0.22
VRK3-212ENST00000596814 FAAH2Q6GMR7 532 aa13.68□□□□□ -0.22
VRK3-212ENST00000596814 TNFAIP8L2Q6P589 184 aaPredicted RBP13.68□□□□□ -0.22
VRK3-212ENST00000596814 NET1Q7Z628 596 aaPredicted RBP13.68□□□□□ -0.22
VRK3-212ENST00000596814 TMEM151BQ8IW70 566 aa13.68□□□□□ -0.22
VRK3-212ENST00000596814 TNIP2Q8NFZ5 429 aa13.68□□□□□ -0.22
VRK3-212ENST00000596814 CT55Q8WUE5 264 aa13.68□□□□□ -0.22
VRK3-212ENST00000596814 ASB9Q96DX5 294 aa13.68□□□□□ -0.22
VRK3-212ENST00000596814 SLC46A1Q96NT5 459 aa13.68□□□□□ -0.22
VRK3-212ENST00000596814 CNPPD1Q9BV87 410 aa13.68□□□□□ -0.22
VRK3-212ENST00000596814 ERVK-19Q9WJR5 959 aa13.68□□□□□ -0.22
VRK3-212ENST00000596814 PADI2Q9Y2J8 665 aa13.68□□□□□ -0.22
VRK3-212ENST00000596814 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 H0YHG0 523 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 STMND1H3BQB6 276 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 PSMG1O95456 288 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 CBX7O95931 251 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 MATN1P21941 496 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 SOX11P35716 441 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 MAGEA8P43361 318 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 ANXA11P50995 505 aaKnown RBP13.67□□□□□ -0.22
VRK3-212ENST00000596814 DSTNP60981 165 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 EXOSC7Q15024 291 aaKnown RBP13.67□□□□□ -0.22
VRK3-212ENST00000596814 GCNT6Q5T4J0 391 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 NLGN4XQ8N0W4 816 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 HORMAD2Q8N7B1 307 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 ENDOVQ8N8Q3 282 aaKnown RBP13.67□□□□□ -0.22
VRK3-212ENST00000596814 SIMC1Q8NDZ2 872 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 NLGN4YQ8NFZ3 816 aaPredicted RBP13.67□□□□□ -0.22
VRK3-212ENST00000596814 PTPMT1Q8WUK0 201 aaPredicted RBP13.67□□□□□ -0.22
VRK3-212ENST00000596814 GIMAP5Q96F15 307 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 PCDHAC1Q9H158 963 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 MUC13Q9H3R2 512 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 SERHL2Q9H4I8 314 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 EGFL7Q9UHF1 273 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 ZNF639Q9UID6 485 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 FAF1Q9UNN5 650 aaPredicted RBP13.67□□□□□ -0.22
VRK3-212ENST00000596814 PTRH2Q9Y3E5 179 aaKnown RBP13.67□□□□□ -0.22
VRK3-212ENST00000596814 CLCA3PQ9Y6N3 262 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 ELOVL7A1L3X0 281 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 A8MUA0 341 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 BRINP1O60477 761 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 RAD1O60671 282 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 TNFRSF21O75509 655 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 BCAS2O75934 225 aaPredicted RBP13.67□□□□□ -0.22
VRK3-212ENST00000596814 STAMBPO95630 424 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 NUDT7P0C024 238 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 RAB40ALP0C0E4 278 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 BMP2P12643 396 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 TCN2P20062 427 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 CD82P27701 267 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 SSTR4P31391 388 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 FOLR3P41439 243 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 PRIM2P49643 509 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 TXNL4AP83876 142 aaKnown RBP13.67□□□□□ -0.22
VRK3-212ENST00000596814 MFSD12Q6NUT3 480 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 ERICH5Q6P6B1 374 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 IGF2-ASQ6U949 168 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 ANKRD37Q7Z713 158 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 PTRH1Q86Y79 214 aaKnown RBP13.67□□□□□ -0.22
VRK3-212ENST00000596814 ZZZ3Q8IYH5 903 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 MICU2Q8IYU8 434 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 OR52R1Q8NGF1 315 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 OR2Y1Q8NGV0 311 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 OR14A16Q8NHC5 309 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 MIPOL1Q8TD10 442 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 JADE3Q92613 823 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 DAZLQ92904 295 aaKnown RBP13.67□□□□□ -0.22
VRK3-212ENST00000596814 FBXL20Q96IG2 436 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 YIPF4Q9BSR8 244 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 ACTRT3Q9BYD9 372 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 OR51I1Q9H343 314 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 C19orf25Q9UFG5 118 aaPredicted RBP13.67□□□□□ -0.22
VRK3-212ENST00000596814 BCAP29Q9UHQ4 241 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 SNX13Q9Y5W8 968 aa13.67□□□□□ -0.22
VRK3-212ENST00000596814 CDRT15L2A8MXV6 281 aa13.66□□□□□ -0.22
VRK3-212ENST00000596814 HRKO00198 91 aa13.66□□□□□ -0.22
VRK3-212ENST00000596814 PRAMEF2O60811 474 aa13.66□□□□□ -0.22
VRK3-212ENST00000596814 KLF7O75840 302 aaPredicted RBP13.66□□□□□ -0.22
VRK3-212ENST00000596814 S1PR1P21453 382 aa13.66□□□□□ -0.22
VRK3-212ENST00000596814 MS4A2Q01362 244 aa13.66□□□□□ -0.22
VRK3-212ENST00000596814 FUT7Q11130 342 aa13.66□□□□□ -0.22
VRK3-212ENST00000596814 TRAP1Q12931 704 aaKnown RBP13.66□□□□□ -0.22
VRK3-212ENST00000596814 FLOT2Q14254 428 aa13.66□□□□□ -0.22
VRK3-212ENST00000596814 ADRM1Q16186 407 aa13.66□□□□□ -0.22
VRK3-212ENST00000596814 FXNQ16595 210 aa13.66□□□□□ -0.22
VRK3-212ENST00000596814 SFT2D3Q587I9 215 aa13.66□□□□□ -0.22
VRK3-212ENST00000596814 CDC73Q6P1J9 531 aa13.66□□□□□ -0.22
VRK3-212ENST00000596814 TMEM205Q6UW68 189 aa13.66□□□□□ -0.22
VRK3-212ENST00000596814 PTOV1Q86YD1 416 aa13.66□□□□□ -0.22
VRK3-212ENST00000596814 LGI4Q8N135 537 aa13.66□□□□□ -0.22
VRK3-212ENST00000596814 OR5D16Q8NGK9 328 aa13.66□□□□□ -0.22
VRK3-212ENST00000596814 FBXO30Q8TB52 745 aa13.66□□□□□ -0.22
VRK3-212ENST00000596814 WDR60Q8WVS4 1066 aa13.66□□□□□ -0.22
VRK3-212ENST00000596814 C16orf58Q96GQ5 468 aa13.66□□□□□ -0.22
VRK3-212ENST00000596814 ART5Q96L15 291 aa13.66□□□□□ -0.22
VRK3-212ENST00000596814 TMEM38AQ9H6F2 299 aa13.66□□□□□ -0.22
VRK3-212ENST00000596814 MAGEL2Q9UJ55 1249 aa13.66□□□□□ -0.22
VRK3-212ENST00000596814 WDFY3Q8IZQ1 3526 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms