RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 CCT7Q99832 543 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 SH3GL2Q99962 352 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 C1orf50Q9BV19 199 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 STMN4Q9H169 189 aaPredicted RBP10.29□□□□□ -0.76
VRK3-210ENST00000596121 NXF5Q9H1B4 397 aaKnown RBP10.29□□□□□ -0.76
VRK3-210ENST00000596121 TSPAN10Q9H1Z9 355 aaPredicted RBP10.29□□□□□ -0.76
VRK3-210ENST00000596121 GLIPR2Q9H4G4 154 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 PROK2Q9HC23 129 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 PFDN4Q9NQP4 134 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 AGPAT4Q9NRZ5 378 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 HPF1Q9NWY4 346 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 ERVK-11Q9UQG0 969 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.29□□□□□ -0.76
VRK3-210ENST00000596121 WBP11Q9Y2W2 641 aaKnown RBP10.29□□□□□ -0.76
VRK3-210ENST00000596121 RAP2CQ9Y3L5 183 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 EML6Q6ZMW3 1958 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 SEMA7AO75326 666 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 FBXO45P0C2W1 286 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 RNF224P0DH78 156 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 CCL3P10147 92 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 EDN3P14138 238 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 EFNA1P20827 205 aaPredicted RBP10.28□□□□□ -0.76
VRK3-210ENST00000596121 GRK2P25098 689 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 RPL14P50914 215 aaKnown RBP10.28□□□□□ -0.76
VRK3-210ENST00000596121 KCNK10P57789 538 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 PDE7AQ13946 482 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 PTGR1Q14914 329 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 NNATQ16517 81 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 IL23RQ5VWK5 629 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 CHERPQ8IWX8 916 aaKnown RBP10.28□□□□□ -0.76
VRK3-210ENST00000596121 GPALPP1Q8IXQ4 340 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 PRR22Q8IZ63 422 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 LIX1Q8N485 282 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 KRTCAP2Q8N6L1 136 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 ST6GALNAC3Q8NDV1 305 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 OR10G3Q8NGC4 313 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 DNAJB8Q8NHS0 232 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 TP53INP1Q96A56 240 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 ATP6V1G3Q96LB4 118 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 PPP3R2Q96LZ3 170 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 AMDHD1Q96NU7 426 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 ITPAQ9BY32 194 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 REEP4Q9H6H4 257 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 AKTIPQ9H8T0 292 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.28□□□□□ -0.76
VRK3-210ENST00000596121 BCAP29Q9UHQ4 241 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 TMED5Q9Y3A6 229 aa10.28□□□□□ -0.76
VRK3-210ENST00000596121 NPIPA5E9PKD4 350 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 PLOD3O60568 738 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 TBX19O60806 448 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 CRYABP02511 175 aaKnown RBP10.27□□□□□ -0.77
VRK3-210ENST00000596121 PIGAP37287 484 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 MC3RP41968 323 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 DNASE1L1P49184 302 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 NCBP2P52298 156 aaKnown RBP eCLIP10.27□□□□□ -0.77
VRK3-210ENST00000596121 FBXW4P57775 412 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 OCRLQ01968 901 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 FOXO1Q12778 655 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 BICRALQ6AI39 1079 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 OPN5Q6U736 354 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 NPSR1Q6W5P4 371 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 RTL4Q6ZR62 310 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 ZNF551Q7Z340 670 aaPredicted RBP10.27□□□□□ -0.77
VRK3-210ENST00000596121 HDXQ7Z353 690 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 FGD2Q7Z6J4 655 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 FAM9CQ8IZT9 166 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 SLC15A4Q8N697 577 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 ZFP62Q8NB50 900 aaPredicted RBP10.27□□□□□ -0.77
VRK3-210ENST00000596121 OR2M7Q8NG81 312 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 OR7A2PQ8NGA2 310 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 PRR7Q8TB68 274 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 TMEM125Q96AQ2 219 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 TUBGCP3Q96CW5 907 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 SPACA9Q96E40 222 aaPredicted RBP10.27□□□□□ -0.77
VRK3-210ENST00000596121 VSTM2LQ96N03 204 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 BBS4Q96RK4 519 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 NUF2Q9BZD4 464 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 TIMMDC1Q9NPL8 285 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 MIEF1Q9NQG6 463 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 ZNF446Q9NWS9 450 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 ATP6V1HQ9UI12 483 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 CNOT11Q9UKZ1 510 aaKnown RBP10.27□□□□□ -0.77
VRK3-210ENST00000596121 NPIPA1Q9UND3 350 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 ENTPD4Q9Y227 616 aa10.27□□□□□ -0.77
VRK3-210ENST00000596121 GPR55Q9Y2T6 319 aaPredicted RBP10.27□□□□□ -0.77
VRK3-210ENST00000596121 KLF13Q9Y2Y9 288 aaPredicted RBP10.27□□□□□ -0.77
VRK3-210ENST00000596121 CHCHD2Q9Y6H1 151 aaPredicted RBP10.27□□□□□ -0.77
VRK3-210ENST00000596121 FLNBO75369 2602 aaKnown RBP10.27□□□□□ -0.77
VRK3-210ENST00000596121 UPK1AO00322 258 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 SDHDO14521 159 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 GLSO94925 669 aaPredicted RBP10.26□□□□□ -0.77
VRK3-210ENST00000596121 UNC5CO95185 931 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 PSMG1O95456 288 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 CT45A8P0DMV1 189 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 CT45A9P0DMV2 189 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 LAMP1P11279 417 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 G6PDP11413 515 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 CNR1P21554 472 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 ABCD3P28288 659 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 MPIP34949 423 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms