RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CASC3O15234 703 aaKnown RBP12.51□□□□□ -0.41
VRK3-209ENST00000594948 ERGP11308 486 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 KELP23276 732 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 IFNGR2P38484 337 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 NNMTP40261 264 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 CCT3P49368 545 aaKnown RBP12.51□□□□□ -0.41
VRK3-209ENST00000594948 EVX1P49640 407 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 HOXC5Q00444 222 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 CD83Q01151 205 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 FABP5Q01469 135 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 PIN1Q13526 163 aaPredicted RBP12.51□□□□□ -0.41
VRK3-209ENST00000594948 DSG2Q14126 1118 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 SNAPC1Q16533 368 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 TATDN3Q17R31 274 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 SPOUT1Q5T280 376 aaKnown RBP12.51□□□□□ -0.41
VRK3-209ENST00000594948 PRAMEF8Q5VWM4 474 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 PRAMEF7Q5VXH5 474 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 PDZD3Q86UT5 571 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 CELF5Q8N6W0 485 aaKnown RBP12.51□□□□□ -0.41
VRK3-209ENST00000594948 YIPF7Q8N8F6 280 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 ZNF740Q8NDX6 193 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 OR52P1PQ8NH57 321 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 UBASH3BQ8TF42 649 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 RAD51AP1Q96B01 352 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 CAMK1GQ96NX5 476 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 SLC38A2Q96QD8 506 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 KCNJ15Q99712 375 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 MARVELD1Q9BSK0 173 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 TMEM43Q9BTV4 400 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 SORBS1Q9BX66 1292 aaKnown RBP12.51□□□□□ -0.41
VRK3-209ENST00000594948 SLC46A2Q9BY10 475 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 SERHL2Q9H4I8 314 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 WASH6PQ9NQA3 447 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 GIMAP4Q9NUV9 329 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 ASB6Q9NWX5 421 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 ING3Q9NXR8 418 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 SRRDQ9UH36 339 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 GPR34Q9UPC5 381 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 ALG5Q9Y673 324 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 LTBP2Q14767 1821 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 NEDD8-MDP1E9PL57 170 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 TEX28O15482 410 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 CHST10O43529 356 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 SLC19A2O60779 497 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 ZNF780AO75290 641 aaPredicted RBP12.5□□□□□ -0.41
VRK3-209ENST00000594948 UBXN7O94888 489 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 TBX6O95947 436 aaPredicted RBP12.5□□□□□ -0.41
VRK3-209ENST00000594948 LRG1P02750 347 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 CSF2P04141 144 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 CTSLP07711 333 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 LIMS3P0CW19 117 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 LIMS4P0CW20 117 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 HSD17B2P37059 387 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 MTNR1AP48039 350 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 MAN2A2P49641 1150 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 KHKP50053 298 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 FOXD4Q12950 439 aaPredicted RBP12.5□□□□□ -0.41
VRK3-209ENST00000594948 GNA13Q14344 377 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 ARHGAP19Q14CB8 494 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 SLC27A4Q6P1M0 643 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 CNIH2Q6PI25 160 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.5□□□□□ -0.41
VRK3-209ENST00000594948 IQCHQ86VS3 1027 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 NUDT13Q86X67 352 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 GJD3Q8N144 294 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 Q8N402 240 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 POGLUT1Q8NBL1 392 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 TEX47Q8TBZ9 253 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 PXYLP1Q8TE99 480 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 IRF7Q92985 503 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 TMEM203Q969S6 136 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 ATF6BQ99941 703 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 AIF1LQ9BQI0 150 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 JAM3Q9BX67 310 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 ZDHHC5Q9C0B5 715 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 SAGE1Q9NXZ1 904 aa12.5□□□□□ -0.41
VRK3-209ENST00000594948 A0A1W2PRU2 124 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 CASKO14936 926 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 LYRM1O43325 122 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 ORC5O43913 435 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 SOD1P00441 154 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 FHP07954 510 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 CCNYL3P0C7X3 344 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 LAG3P18627 525 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 APEX1P27695 318 aaKnown RBP12.49□□□□□ -0.41
VRK3-209ENST00000594948 HOXD10P28358 340 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 BTG1P62324 171 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 REEP5Q00765 189 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 HSPB3Q12988 150 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 OR2G6Q5TZ20 316 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 TMEM64Q6YI46 380 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 CREB3L2Q70SY1 520 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 TRILQ7L0X0 811 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 C17orf64Q86WR6 236 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 TRIM48Q8IWZ4 208 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 ARIH2OSQ8N7S6 290 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 NLGN4YQ8NFZ3 816 aaPredicted RBP12.49□□□□□ -0.41
VRK3-209ENST00000594948 OR2L2Q8NH16 312 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 ACOT12Q8WYK0 555 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 RFKQ969G6 155 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms