RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 MTBPQ96DY7 904 aa12.17□□□□□ -0.46
APOC1-209ENST00000592885 HSPBAP1Q96EW2 488 aa12.17□□□□□ -0.46
APOC1-209ENST00000592885 LRRC46Q96FV0 321 aa12.17□□□□□ -0.46
APOC1-209ENST00000592885 SHCBP1LQ9BZQ2 653 aa12.17□□□□□ -0.46
APOC1-209ENST00000592885 PRDM14Q9GZV8 571 aa12.17□□□□□ -0.46
APOC1-209ENST00000592885 CES1P1Q9UKY3 287 aa12.17□□□□□ -0.46
APOC1-209ENST00000592885 NINQ8N4C6 2090 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 C15orf38-AP3S2A0A0A6YYH1 394 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 EXOC1LA0A1B0GW35 172 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 A0A1W2PS29 197 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 POC1B-GALNT4F8VUJ3 575 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 PPM1BO75688 479 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 LRATO95237 230 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 PDYNP01213 254 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 RHOXF2BP0C7M4 288 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 S1PR1P21453 382 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 TIMP3P35625 211 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 CASP3P42574 277 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 RIPPLY3P57055 190 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 DCAF7P61962 342 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 DUSP8Q13202 625 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 MYBPHQ13203 477 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 SNTA1Q13424 505 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 RASA2Q15283 850 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 ACSF3Q4G176 576 aaPredicted RBP12.16□□□□□ -0.46
APOC1-209ENST00000592885 TIFABQ6ZNK6 161 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 TMEM200AQ86VY9 491 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 SAMD14Q8IZD0 417 aaPredicted RBP12.16□□□□□ -0.46
APOC1-209ENST00000592885 NOA1Q8NC60 698 aaKnown RBP12.16□□□□□ -0.46
APOC1-209ENST00000592885 IFT81Q8WYA0 676 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 ERP27Q96DN0 273 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 DTNBP1Q96EV8 351 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 ALKBH4Q9NXW9 302 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 MAT2BQ9NZL9 334 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 PRODH2Q9UF12 536 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 ZNF639Q9UID6 485 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 FOXD3Q9UJU5 478 aaPredicted RBP12.16□□□□□ -0.46
APOC1-209ENST00000592885 ITGB1BP2Q9UKP3 347 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 NFU1Q9UMS0 254 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 L3MBTL1Q9Y468 752 aa12.16□□□□□ -0.46
APOC1-209ENST00000592885 TACC2O95359 2948 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 TEP1Q99973 2627 aaKnown RBP12.15□□□□□ -0.46
APOC1-209ENST00000592885 DVL2O14641 736 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 BCAS2O75934 225 aaPredicted RBP12.15□□□□□ -0.46
APOC1-209ENST00000592885 ZWINTO95229 277 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 EPPINO95925 133 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 KRT6AP02538 564 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 KRT6BP04259 564 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 ABCB1P08183 1280 aaPredicted RBP12.15□□□□□ -0.46
APOC1-209ENST00000592885 SBK3P0C264 359 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 CD1EP15812 388 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 GCKP35557 465 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 KRT6CP48668 564 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 TRPC1P48995 793 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 ASCL1P50553 236 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 CLCQ05315 142 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 FBXL19-AS1Q494R0 122 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 SGO1Q5FBB7 561 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 FNDC7Q5VTL7 733 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 TIGD3Q6B0B8 471 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 SLC30A6Q6NXT4 461 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 TMEM64Q6YI46 380 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 NUP54Q7Z3B4 507 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 WDR53Q7Z5U6 358 aaPredicted RBP12.15□□□□□ -0.46
APOC1-209ENST00000592885 LIX1LQ8IVB5 337 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 TMEM151AQ8N4L1 468 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 GBP7Q8N8V2 638 aaPredicted RBP12.15□□□□□ -0.46
APOC1-209ENST00000592885 ZNF675Q8TD23 568 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 TM4SF18Q96CE8 201 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 CTHRC1Q96CG8 243 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 KLHL29Q96CT2 875 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 LCORQ96JN0 433 aaPredicted RBP12.15□□□□□ -0.46
APOC1-209ENST00000592885 ZNF382Q96SR6 550 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 TIMP4Q99727 224 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 ITPAQ9BY32 194 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 BRINP2Q9C0B6 783 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 NXF5Q9H1B4 397 aaKnown RBP12.15□□□□□ -0.46
APOC1-209ENST00000592885 METTL7AQ9H8H3 244 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 FARSBQ9NSD9 589 aaKnown RBP12.15□□□□□ -0.46
APOC1-209ENST00000592885 VPS29Q9UBQ0 182 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 ZNF629Q9UEG4 869 aaPredicted RBP12.15□□□□□ -0.46
APOC1-209ENST00000592885 FETUBQ9UGM5 382 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 MCM8Q9UJA3 840 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 ZNF780BQ9Y6R6 833 aa12.15□□□□□ -0.46
APOC1-209ENST00000592885 AKAP9Q99996 3911 aa12.14□□□□□ -0.47
APOC1-209ENST00000592885 A0A1B0GTL3 188 aa12.14□□□□□ -0.47
APOC1-209ENST00000592885 CCDC151A5D8V7 595 aa12.14□□□□□ -0.47
APOC1-209ENST00000592885 CD8B2A6NJW9 211 aa12.14□□□□□ -0.47
APOC1-209ENST00000592885 KIF2AO00139 706 aaPredicted RBP12.14□□□□□ -0.47
APOC1-209ENST00000592885 MANBAO00462 879 aa12.14□□□□□ -0.47
APOC1-209ENST00000592885 TO15178 435 aa12.14□□□□□ -0.47
APOC1-209ENST00000592885 ERAL1O75616 437 aaKnown RBP12.14□□□□□ -0.47
APOC1-209ENST00000592885 TRAPPC6AO75865 159 aa12.14□□□□□ -0.47
APOC1-209ENST00000592885 OR4F21O95013 312 aa12.14□□□□□ -0.47
APOC1-209ENST00000592885 PTPN6P29350 595 aa12.14□□□□□ -0.47
APOC1-209ENST00000592885 CEACAM8P31997 349 aaPredicted RBP12.14□□□□□ -0.47
APOC1-209ENST00000592885 HSD17B3P37058 310 aa12.14□□□□□ -0.47
APOC1-209ENST00000592885 GSTM5P46439 218 aa12.14□□□□□ -0.47
APOC1-209ENST00000592885 CDH13P55290 713 aa12.14□□□□□ -0.47
APOC1-209ENST00000592885 PLCXD2Q0VAA5 305 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms