RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 LHPPQ9H008 270 aa11.32□□□□□ -0.6
DNMT1-218ENST00000589294 CXorf36Q9H7Y0 433 aa11.32□□□□□ -0.6
DNMT1-218ENST00000589294 CPNE5Q9HCH3 593 aa11.32□□□□□ -0.6
DNMT1-218ENST00000589294 SIRT3Q9NTG7 399 aaPredicted RBP11.32□□□□□ -0.6
DNMT1-218ENST00000589294 PRODH2Q9UF12 536 aa11.32□□□□□ -0.6
DNMT1-218ENST00000589294 BCAP29Q9UHQ4 241 aa11.32□□□□□ -0.6
DNMT1-218ENST00000589294 ZMIZ1Q9ULJ6 1067 aa11.32□□□□□ -0.6
DNMT1-218ENST00000589294 VPS4AQ9UN37 437 aa11.32□□□□□ -0.6
DNMT1-218ENST00000589294 KCNMB2Q9Y691 235 aa11.32□□□□□ -0.6
DNMT1-218ENST00000589294 DSPP15924 2871 aaKnown RBP11.31□□□□□ -0.6
DNMT1-218ENST00000589294 A0A096LPI6 279 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 ASPDHA6ND91 283 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 ARGFXA6NJG6 315 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 TTC36A6NLP5 189 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 CDK2AP1O14519 115 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 PRAMEF2O60811 474 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 COQ9O75208 318 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 PSMG1O95456 288 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 ABCB1P08183 1280 aaPredicted RBP11.31□□□□□ -0.6
DNMT1-218ENST00000589294 COX4I1P13073 169 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 CD1EP15812 388 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 SSTR4P31391 388 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 PTGER1P34995 402 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 MC3RP41968 323 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 MAGEA8P43361 318 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 EMDP50402 254 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 CDK9P50750 372 aaKnown RBP11.31□□□□□ -0.6
DNMT1-218ENST00000589294 DCAF7P61962 342 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 RNF4P78317 190 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 CHAF1BQ13112 559 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 MYBPC3Q14896 1274 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 KRT72Q14CN4 511 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 SPDYE7PQ495Y7 208 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 SLC2A7Q6PXP3 512 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 ZNF621Q6ZSS3 439 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 SLC29A4Q7RTT9 530 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 SNX32Q86XE0 403 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 TREML1Q86YW5 311 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 ARMC10Q8N2F6 343 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 GALNT16Q8N428 558 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 PCYOX1LQ8NBM8 494 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 NUP43Q8NFH3 380 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 OR52R1Q8NGF1 315 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 OR56A1Q8NGH5 318 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 TP53INP1Q96A56 240 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 FAM120BQ96EK7 910 aaKnown RBP11.31□□□□□ -0.6
DNMT1-218ENST00000589294 THOC3Q96J01 351 aaKnown RBP11.31□□□□□ -0.6
DNMT1-218ENST00000589294 INPP5KQ9BT40 448 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 TRIM4Q9C037 500 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 EFCAB1Q9HAE3 211 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 DDX18Q9NVP1 670 aaKnown RBP11.31□□□□□ -0.6
DNMT1-218ENST00000589294 SNX8Q9Y5X2 465 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 CFAP47Q6ZTR5 3102 aa11.31□□□□□ -0.6
DNMT1-218ENST00000589294 KCNH1O95259 989 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 ANP32DO95626 131 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 CLPSP04118 112 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 ITGB2P05107 769 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 DRD5P21918 477 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 PTPN6P29350 595 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 PPICP45877 212 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 PSPHP78330 225 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 TXNL4AP83876 142 aaKnown RBP11.3□□□□□ -0.6
DNMT1-218ENST00000589294 EXOSC7Q15024 291 aaKnown RBP11.3□□□□□ -0.6
DNMT1-218ENST00000589294 MMEL1Q495T6 779 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 PAGE3Q5JUK9 113 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 C6orf10Q5SRN2 563 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 LRIF1Q5T3J3 769 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 IRAK1BP1Q5VVH5 260 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 BORAQ6PGQ7 559 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 C6orf120Q7Z4R8 191 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 LGI4Q8N135 537 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 SLC5A8Q8N695 610 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 ZNF321PQ8N8H1 164 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 C17orf47Q8NEP4 570 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 C16orf52Q8NHV5 167 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 NUBPLQ8TB37 319 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 DOK4Q8TEW6 326 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 PSMF1Q92530 271 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 MAGED4Q96JG8 741 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 PAIP1Q9H074 479 aaKnown RBP11.3□□□□□ -0.6
DNMT1-218ENST00000589294 ZCCHC3Q9NUD5 404 aaKnown RBP11.3□□□□□ -0.6
DNMT1-218ENST00000589294 MAP10Q9P2G4 905 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 TEKT2Q9UIF3 430 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 ZNF223Q9UK11 482 aaPredicted RBP11.3□□□□□ -0.6
DNMT1-218ENST00000589294 HEMK1Q9Y5R4 338 aaPredicted RBP11.3□□□□□ -0.6
DNMT1-218ENST00000589294 GMEB1Q9Y692 573 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 ZZEF1O43149 2961 aa11.3□□□□□ -0.6
DNMT1-218ENST00000589294 PTPRQQ9UMZ3 2332 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 TRBV11-1A0A0K0K1C0 115 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 C2orf92A0A1B0GVN3 265 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 A8MUI8 341 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 FBP2O00757 339 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 CEACAM4O75871 244 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 KRT75O95678 551 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 GSNP06396 782 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 KRT16P08779 473 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 ITGAMP11215 1152 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 ITGA3P26006 1051 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 CDKN2CP42773 168 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 PRIM2P49643 509 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms