RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 TMEM26Q6ZUK4 368 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 VPS36Q86VN1 386 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 RANBP3LQ86VV4 465 aaPredicted RBP2.78□□□□□ -1.96
SMAD4-207ENST00000589076 CCDC71Q8IV32 467 aaPredicted RBP2.78□□□□□ -1.96
SMAD4-207ENST00000589076 RNF148Q8N7C7 305 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 RELL2Q8NC24 303 aaPredicted RBP2.78□□□□□ -1.96
SMAD4-207ENST00000589076 CSNK1G2-AS1Q8NCQ2 148 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 FAM71CQ8NEG0 241 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 RASL10AQ92737 203 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 MRPL38Q96DV4 380 aaKnown RBP2.78□□□□□ -1.96
SMAD4-207ENST00000589076 SAMD8Q96LT4 415 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 DEFB118Q96PH6 123 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 NDUFAF3Q9BU61 184 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 CCDC28BQ9BUN5 200 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 RBM24Q9BX46 236 aaKnown RBP2.78□□□□□ -1.96
SMAD4-207ENST00000589076 KRT23Q9C075 422 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 RAB17Q9H0T7 212 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 CLIP2Q9UDT6 1046 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 SEC14L4Q9UDX3 406 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 MIOXQ9UGB7 285 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 BCAP29Q9UHQ4 241 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 KLHDC2Q9Y2U9 406 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 ZNF175Q9Y473 711 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 GON4LQ3T8J9 2241 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 RALGAPA1Q6GYQ0 2036 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 CUX2O14529 1486 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 CYB561D2O14569 222 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 IGHV3-13P01766 116 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 FCGR3AP08637 254 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 CCDC159P0C7I6 412 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 DNAJB1P25685 340 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 RPA1P27694 616 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 PRDX6P30041 224 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 CCND2P30279 289 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 HSPA1LP34931 641 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 ETV5P41161 510 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 GMFBP60983 142 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 GABPB1Q06547 395 aaPredicted RBP2.77□□□□□ -1.97
SMAD4-207ENST00000589076 CD300CQ08708 224 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 PDIA5Q14554 519 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 ZSWIM7Q19AV6 140 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 ZNF528Q3MIS6 628 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 TTC31Q49AM3 519 aaPredicted RBP2.77□□□□□ -1.97
SMAD4-207ENST00000589076 UNC50Q53HI1 259 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 TCHHL1Q5QJ38 904 aaPredicted RBP2.77□□□□□ -1.97
SMAD4-207ENST00000589076 REP15Q6BDI9 236 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 RAET1GQ6H3X3 334 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 GPRIN3Q6ZVF9 776 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 MOB2Q70IA6 237 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 GOLGA7Q7Z5G4 137 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 ADCK1Q86TW2 530 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 LUZP1Q86V48 1076 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 AMZ2Q86W34 360 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 LRRC49Q8IUZ0 686 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 PYROXD2Q8N2H3 581 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 Q8N377 158 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 DQX1Q8TE96 717 aaKnown RBP2.77□□□□□ -1.97
SMAD4-207ENST00000589076 NCLNQ969V3 563 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 CCDC51Q96ER9 411 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 CPXM1Q96SM3 734 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 NLNQ9BYT8 704 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 TRIM6Q9C030 488 aaPredicted RBP2.77□□□□□ -1.97
SMAD4-207ENST00000589076 LIME1Q9H400 295 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 TMEM231Q9H6L2 316 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 ACTR3BQ9P1U1 418 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 KLK13Q9UKR3 277 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 EMCNQ9ULC0 261 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 PLA2G4CQ9UP65 541 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 SLC9A8Q9Y2E8 581 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 MRPL11Q9Y3B7 192 aaKnown RBP2.77□□□□□ -1.97
SMAD4-207ENST00000589076 CLCA3PQ9Y6N3 262 aa2.77□□□□□ -1.97
SMAD4-207ENST00000589076 NCAPD2Q15021 1401 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 IGHV3-16A0A0C4DH30 117 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 TEX48A0A1B0GUV7 120 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 RPL37AP8A6NKH3 93 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 K7ERI5 159 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 EI24O14681 340 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 STK17BO94768 372 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 ECDO95905 644 aaPredicted RBP2.76□□□□□ -1.97
SMAD4-207ENST00000589076 MT-ND1P03886 318 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 HCKP08631 526 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 HSD17B1P14061 328 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 GATA1P15976 413 aaPredicted RBP2.76□□□□□ -1.97
SMAD4-207ENST00000589076 TRIM23P36406 574 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 GSK3BP49841 420 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 SGSHP51688 502 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 SLC7A2P52569 658 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 SLC26A5P58743 744 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 HERVK_113P63132 956 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 ERVK-8P63133 956 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 SPP2Q13103 211 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 DPYSQ14117 519 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 CCL14Q16627 93 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 PARP6Q2NL67 630 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 ACSF3Q4G176 576 aaPredicted RBP2.76□□□□□ -1.97
SMAD4-207ENST00000589076 VWA2Q5GFL6 755 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 TAF3Q5VWG9 929 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 LIPKQ5VXJ0 399 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 SEL1L3Q68CR1 1132 aa2.76□□□□□ -1.97
SMAD4-207ENST00000589076 IRGCQ6NXR0 463 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms