RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 NME6O75414 186 aaPredicted RBP21.1■□□□□ 0.97
ACTN4-210ENST00000588618 BCAS2O75934 225 aaPredicted RBP21.1■□□□□ 0.97
ACTN4-210ENST00000588618 IFI6P09912 130 aa21.1■□□□□ 0.97
ACTN4-210ENST00000588618 OTX2P32243 289 aa21.1■□□□□ 0.97
ACTN4-210ENST00000588618 MVDP53602 400 aa21.1■□□□□ 0.97
ACTN4-210ENST00000588618 TGIF1Q15583 401 aa21.1■□□□□ 0.97
ACTN4-210ENST00000588618 OR2L13Q8N349 312 aa21.1■□□□□ 0.97
ACTN4-210ENST00000588618 PTPMT1Q8WUK0 201 aaPredicted RBP21.1■□□□□ 0.97
ACTN4-210ENST00000588618 UTP4Q969X6 686 aaKnown RBP21.1■□□□□ 0.97
ACTN4-210ENST00000588618 MCUR1Q96AQ8 359 aa21.1■□□□□ 0.97
ACTN4-210ENST00000588618 C8orf44Q96CB5 159 aa21.1■□□□□ 0.97
ACTN4-210ENST00000588618 CTHRC1Q96CG8 243 aa21.1■□□□□ 0.97
ACTN4-210ENST00000588618 OR8D2Q9GZM6 311 aa21.1■□□□□ 0.97
ACTN4-210ENST00000588618 TMEM181Q9P2C4 612 aa21.1■□□□□ 0.97
ACTN4-210ENST00000588618 ABCD2Q9UBJ2 740 aa21.1■□□□□ 0.97
ACTN4-210ENST00000588618 WASF3Q9UPY6 502 aa21.1■□□□□ 0.97
ACTN4-210ENST00000588618 IGHV3-20A0A0C4DH32 117 aa21.09■□□□□ 0.97
ACTN4-210ENST00000588618 UPK1AO00322 258 aa21.09■□□□□ 0.97
ACTN4-210ENST00000588618 SORBS2O94875 1100 aaKnown RBP21.09■□□□□ 0.97
ACTN4-210ENST00000588618 KCNJ2P63252 427 aa21.09■□□□□ 0.97
ACTN4-210ENST00000588618 EEF1A2Q05639 463 aaKnown RBP21.09■□□□□ 0.97
ACTN4-210ENST00000588618 FHL5Q5TD97 284 aa21.09■□□□□ 0.97
ACTN4-210ENST00000588618 PAPD4Q6PIY7 484 aaKnown RBP21.09■□□□□ 0.97
ACTN4-210ENST00000588618 BNC2Q6ZN30 1099 aaPredicted RBP21.09■□□□□ 0.97
ACTN4-210ENST00000588618 C6orf120Q7Z4R8 191 aa21.09■□□□□ 0.97
ACTN4-210ENST00000588618 FBXL20Q96IG2 436 aa21.09■□□□□ 0.97
ACTN4-210ENST00000588618 MS4A4EQ96PG1 132 aa21.09■□□□□ 0.97
ACTN4-210ENST00000588618 CDRT15Q96T59 188 aa21.09■□□□□ 0.97
ACTN4-210ENST00000588618 ECSITQ9BQ95 431 aa21.09■□□□□ 0.97
ACTN4-210ENST00000588618 C19orf53Q9UNZ5 99 aaPredicted RBP21.09■□□□□ 0.97
ACTN4-210ENST00000588618 PCDHGA6Q9Y5G7 932 aa21.09■□□□□ 0.97
ACTN4-210ENST00000588618 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.09■□□□□ 0.97
ACTN4-210ENST00000588618 F8A1P23610 371 aa21.09■□□□□ 0.97
ACTN4-210ENST00000588618 CASP9P55211 416 aa21.09■□□□□ 0.97
ACTN4-210ENST00000588618 VAC14Q08AM6 782 aa21.09■□□□□ 0.97
ACTN4-210ENST00000588618 RNF148Q8N7C7 305 aa21.09■□□□□ 0.97
ACTN4-210ENST00000588618 OR52R1Q8NGF1 315 aa21.09■□□□□ 0.97
ACTN4-210ENST00000588618 NACC2Q96BF6 587 aa21.09■□□□□ 0.97
ACTN4-210ENST00000588618 NEURL3Q96EH8 262 aa21.09■□□□□ 0.97
ACTN4-210ENST00000588618 SENP5Q96HI0 755 aaPredicted RBP21.09■□□□□ 0.97
ACTN4-210ENST00000588618 SLC35G5Q96KT7 338 aa21.09■□□□□ 0.97
ACTN4-210ENST00000588618 THTPAQ9BU02 230 aa21.09■□□□□ 0.97
ACTN4-210ENST00000588618 EQTNQ9NQ60 294 aa21.09■□□□□ 0.97
ACTN4-210ENST00000588618 FAF1Q9UNN5 650 aaPredicted RBP21.09■□□□□ 0.97
ACTN4-210ENST00000588618 AP3M1Q9Y2T2 418 aa21.09■□□□□ 0.97
ACTN4-210ENST00000588618 FRYQ5TBA9 3013 aa21.08■□□□□ 0.97
ACTN4-210ENST00000588618 CEP295Q9C0D2 2601 aa21.08■□□□□ 0.97
ACTN4-210ENST00000588618 SAGE2PA6NJ88 616 aa21.08■□□□□ 0.97
ACTN4-210ENST00000588618 TERTO14746 1132 aaKnown RBP21.08■□□□□ 0.97
ACTN4-210ENST00000588618 PRAMEF2O60811 474 aa21.08■□□□□ 0.97
ACTN4-210ENST00000588618 DNAJC8O75937 253 aaPredicted RBP21.08■□□□□ 0.97
ACTN4-210ENST00000588618 S1PR1P21453 382 aa21.08■□□□□ 0.97
ACTN4-210ENST00000588618 CRATP43155 626 aa21.08■□□□□ 0.97
ACTN4-210ENST00000588618 ANXA11P50995 505 aaKnown RBP21.08■□□□□ 0.97
ACTN4-210ENST00000588618 DUSP8Q13202 625 aa21.08■□□□□ 0.97
ACTN4-210ENST00000588618 CEACAM7Q14002 265 aa21.08■□□□□ 0.97
ACTN4-210ENST00000588618 EXOSC7Q15024 291 aaKnown RBP21.08■□□□□ 0.97
ACTN4-210ENST00000588618 SAXO2Q658L1 398 aa21.08■□□□□ 0.97
ACTN4-210ENST00000588618 RAB43Q86YS6 212 aa21.08■□□□□ 0.97
ACTN4-210ENST00000588618 MORN4Q8NDC4 146 aa21.08■□□□□ 0.97
ACTN4-210ENST00000588618 OR7G1Q8NGA0 311 aa21.08■□□□□ 0.97
ACTN4-210ENST00000588618 SLC2A12Q8TD20 617 aa21.08■□□□□ 0.97
ACTN4-210ENST00000588618 JADE3Q92613 823 aa21.08■□□□□ 0.97
ACTN4-210ENST00000588618 USP22Q9UPT9 525 aa21.08■□□□□ 0.97
ACTN4-210ENST00000588618 HS3ST3B1Q9Y662 390 aa21.08■□□□□ 0.97
ACTN4-210ENST00000588618 GMEB1Q9Y692 573 aa21.08■□□□□ 0.97
ACTN4-210ENST00000588618 LOC102723996A0A087X1L8 192 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 PRORSD1PA6NEY8 169 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 SEC24DO94855 1032 aaPredicted RBP21.07■□□□□ 0.96
ACTN4-210ENST00000588618 SSTR4P31391 388 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 FUT7Q11130 342 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 LASP1Q14847 261 aaKnown RBP21.07■□□□□ 0.96
ACTN4-210ENST00000588618 COX20Q5RI15 118 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 RNF130Q86XS8 419 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 ARHGAP24Q8N264 748 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 FGF11Q92914 225 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 OR10A5Q9H207 317 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 SERHL2Q9H4I8 314 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 NTMQ9P121 344 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 ZNF639Q9UID6 485 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 PRPF19Q9UMS4 504 aaKnown RBP21.07■□□□□ 0.96
ACTN4-210ENST00000588618 MRPS18BQ9Y676 258 aaKnown RBP21.07■□□□□ 0.96
ACTN4-210ENST00000588618 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 CREG1O75629 220 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 PDE5AO76074 875 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 CBX7O95931 251 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 HMGN2P05204 90 aaKnown RBP21.07■□□□□ 0.96
ACTN4-210ENST00000588618 PRIM2P49643 509 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 RPS26P62854 115 aaKnown RBP21.07■□□□□ 0.96
ACTN4-210ENST00000588618 PIGGQ5H8A4 983 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.07■□□□□ 0.962e-6■■■■■ 32.4
ACTN4-210ENST00000588618 RNF111Q6ZNA4 994 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 B3GNT7Q8NFL0 401 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 OR52N2Q8NGI0 321 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 GIMAP5Q96F15 307 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 KAT8Q9H7Z6 458 aaKnown RBP21.07■□□□□ 0.96
ACTN4-210ENST00000588618 PRODH2Q9UF12 536 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 IL17BQ9UHF5 180 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 CFL2Q9Y281 166 aa21.07■□□□□ 0.96
ACTN4-210ENST00000588618 PCSK5Q92824 1860 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms