RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 NDRG3Q9UGV2 375 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 MID2Q9UJV3 735 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 SLC6A5Q9Y345 797 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 TESMINQ9Y4I5 508 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 NPFFR2Q9Y5X5 522 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 FREM3P0C091 2139 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 NINQ8N4C6 2090 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 CYR61O00622 381 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 PLIN3O60664 434 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 CTNSO60931 367 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 LDB3O75112 727 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 ETHE1O95571 254 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 IL18BPO95998 194 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 IFNA2P01563 188 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 PROCP04070 461 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 VIMP08670 466 aaKnown RBP7.82□□□□□ -1.16
SDF2-204ENST00000587338 MYL2P10916 166 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 COX7A2P14406 83 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 CPA3P15088 417 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 ZNF37AP17032 561 aaPredicted RBP7.82□□□□□ -1.16
SDF2-204ENST00000587338 SERPINB4P48594 390 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 SLC18A1P54219 525 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 LIM2P55344 173 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 AP1S2P56377 157 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 TIAL1Q01085 375 aaKnown RBP eCLIP7.82□□□□□ -1.16
SDF2-204ENST00000587338 ID2Q02363 134 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 TBL3Q12788 808 aaKnown RBP7.82□□□□□ -1.16
SDF2-204ENST00000587338 FOXF2Q12947 444 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 DLG1Q12959 904 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 RCAN2Q14206 197 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 TOMM20Q15388 145 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 DCST1Q5T197 706 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 PODNL1Q6PEZ8 512 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 NXPE4Q6UWF7 544 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 THOC6Q86W42 341 aaKnown RBP7.82□□□□□ -1.16
SDF2-204ENST00000587338 NUDCD3Q8IVD9 361 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 C9orf40Q8IXQ3 194 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 CENPLQ8N0S6 344 aaPredicted RBP7.82□□□□□ -1.16
SDF2-204ENST00000587338 LRRC8CQ8TDW0 803 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 ZNF721Q8TF20 911 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 MED12Q93074 2177 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 FBXL8Q96CD0 374 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 MS4A6EQ96DS6 147 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 GAL3ST4Q96RP7 486 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 MECRQ9BV79 373 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 SFXN3Q9BWM7 321 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 GSX2Q9BZM3 304 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 RABEP2Q9H5N1 569 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 ALG9Q9H6U8 611 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 COPS7BQ9H9Q2 264 aaPredicted RBP7.82□□□□□ -1.16
SDF2-204ENST00000587338 PROK2Q9HC23 129 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 CNIH4Q9P003 139 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 XPR1Q9UBH6 696 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 CNOT11Q9UKZ1 510 aaKnown RBP7.82□□□□□ -1.16
SDF2-204ENST00000587338 EMCNQ9ULC0 261 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 CHCHD2Q9Y6H1 151 aaPredicted RBP7.82□□□□□ -1.16
SDF2-204ENST00000587338 ABCA1O95477 2261 aa7.82□□□□□ -1.16
SDF2-204ENST00000587338 DSCAMO60469 2012 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 NPEPPSL1A6NEC2 478 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 SUPT3HB4E1H0 165 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 SNPHO15079 494 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 SIAH2O43255 324 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 SMIM24O75264 130 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 SUPT3HO75486 399 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 BPGMP07738 259 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 RBP1P09455 135 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 FBXO45P0C2W1 286 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 CD1DP15813 335 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 TAC1P20366 129 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 BGNP21810 368 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 SERPINB3P29508 390 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 ALDH3A1P30838 453 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 CDK9P50750 372 aaKnown RBP7.81□□□□□ -1.16
SDF2-204ENST00000587338 ATP6V0D1P61421 351 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 KRTAP1-1Q07627 177 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 SERTAD2Q14140 314 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 RCN2Q14257 317 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 ACAP2Q15057 778 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 CHI3L2Q15782 390 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 VASNQ6EMK4 673 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 TRIM40Q6P9F5 258 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 LYPD8Q6UX82 237 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 C20orf204Q6ZNR8 217 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 FRA10AC1Q70Z53 315 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 LCA5Q86VQ0 697 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 C10orf107Q8IVU9 208 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 TRIM42Q8IWZ5 723 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 GCNT2Q8N0V5 402 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 ZNF441Q8N8Z8 693 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 MAPK1IP1LQ8NDC0 245 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 NUBPLQ8TB37 319 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 CKAP2Q8WWK9 683 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 DIO2Q92813 273 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 INTS12Q96CB8 462 aaKnown RBP7.81□□□□□ -1.16
SDF2-204ENST00000587338 WDYHV1Q96HA8 205 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 SENP5Q96HI0 755 aaPredicted RBP7.81□□□□□ -1.16
SDF2-204ENST00000587338 MAGEB18Q96M61 343 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 QRFPRQ96P65 431 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 SERINC2Q96SA4 455 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 MRPL57Q9BQC6 102 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms