RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 RCAN2Q14206 197 aa13.55□□□□□ -0.24
SCAMP4-209ENST00000585335 EXOSC7Q15024 291 aaKnown RBP13.55□□□□□ -0.24
SCAMP4-209ENST00000585335 ZNHIT3Q15649 155 aaPredicted RBP13.55□□□□□ -0.24
SCAMP4-209ENST00000585335 MAPKAPK3Q16644 382 aa13.55□□□□□ -0.24
SCAMP4-209ENST00000585335 H3F3CQ6NXT2 135 aa13.55□□□□□ -0.24
SCAMP4-209ENST00000585335 BLOC1S3Q6QNY0 202 aa13.55□□□□□ -0.24
SCAMP4-209ENST00000585335 TMEM64Q6YI46 380 aa13.55□□□□□ -0.24
SCAMP4-209ENST00000585335 RPS19BP1Q86WX3 136 aaKnown RBP13.55□□□□□ -0.24
SCAMP4-209ENST00000585335 OR2L13Q8N349 312 aa13.55□□□□□ -0.24
SCAMP4-209ENST00000585335 ZNF321PQ8N8H1 164 aa13.55□□□□□ -0.24
SCAMP4-209ENST00000585335 OR7G2Q8NG99 324 aa13.55□□□□□ -0.24
SCAMP4-209ENST00000585335 OR56A1Q8NGH5 318 aa13.55□□□□□ -0.24
SCAMP4-209ENST00000585335 NUBPLQ8TB37 319 aa13.55□□□□□ -0.24
SCAMP4-209ENST00000585335 SFXN5Q8TD22 340 aa13.55□□□□□ -0.24
SCAMP4-209ENST00000585335 SPDL1Q96EA4 605 aa13.55□□□□□ -0.24
SCAMP4-209ENST00000585335 CCDC115Q96NT0 180 aa13.55□□□□□ -0.24
SCAMP4-209ENST00000585335 MS4A4EQ96PG1 132 aa13.55□□□□□ -0.24
SCAMP4-209ENST00000585335 PANX1Q96RD7 426 aa13.55□□□□□ -0.24
SCAMP4-209ENST00000585335 ZNF385DQ9H6B1 395 aa13.55□□□□□ -0.24
SCAMP4-209ENST00000585335 C19orf53Q9UNZ5 99 aaPredicted RBP13.55□□□□□ -0.24
SCAMP4-209ENST00000585335 ZNF451Q9Y4E5 1061 aa13.55□□□□□ -0.24
SCAMP4-209ENST00000585335 CAPN7Q9Y6W3 813 aa13.55□□□□□ -0.24
SCAMP4-209ENST00000585335 TTC36A6NLP5 189 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 CDK2AP1O14519 115 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 RFXANKO14593 260 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 ANP32DO95626 131 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 CBX7O95931 251 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 KRT16P08779 473 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 S1PR1P21453 382 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 CCT3P49368 545 aaKnown RBP13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 WNT3P56703 355 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 NRG3P56975 720 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 DCAF7P61962 342 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 HBA1P69905 142 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 PSPHP78330 225 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 ZNF155Q12901 538 aaPredicted RBP13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 MFAP5Q13361 173 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 VPS26BQ4G0F5 336 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 ACER2Q5QJU3 275 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 FHL5Q5TD97 284 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 ANKRD46Q86W74 232 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 HPS6Q86YV9 775 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 C9orf40Q8IXQ3 194 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 CLECL1Q8IZS7 167 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 TAGAPQ8N103 731 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 ZNF615Q8N8J6 731 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 C16orf52Q8NHV5 167 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 PSMA8Q8TAA3 256 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 C9orf43Q8TAL5 461 aaPredicted RBP13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 SLC22A8Q8TCC7 542 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 THAP3Q8WTV1 239 aaPredicted RBP13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 TSPEARQ8WU66 669 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 NUDT8Q8WV74 236 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 TTC9Q92623 222 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 LMF1Q96S06 567 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 SMAD5Q99717 465 aaKnown RBP13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 WWTR1Q9GZV5 400 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 CDCP1Q9H5V8 836 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 SAR1AQ9NR31 198 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 ZCCHC3Q9NUD5 404 aaKnown RBP13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 STMN3Q9NZ72 180 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 MYOTQ9UBF9 498 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 ZNF223Q9UK11 482 aaPredicted RBP13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 VPS4AQ9UN37 437 aa13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 YARS2Q9Y2Z4 477 aaKnown RBP13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 HEMK1Q9Y5R4 338 aaPredicted RBP13.54□□□□□ -0.24
SCAMP4-209ENST00000585335 UPK1AO00322 258 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 ANGPT2O15123 496 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 DCTN3O75935 186 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 SNRPB2P08579 225 aaKnown RBP13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 FAM87AP0C7U9 286 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 SOX11P35716 441 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 PRIM2P49643 509 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 PRKAG1P54619 331 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 MLF1P58340 268 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 EBPQ15125 230 aaKnown RBP13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 LINC00303Q3SY05 128 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 C6orf10Q5SRN2 563 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 TCTN3Q6NUS6 607 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 LINC00696Q6ZRV3 163 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 PIGWQ7Z7B1 504 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 SLC15A4Q8N697 577 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 ANKS4BQ8N8V4 417 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 C17orf47Q8NEP4 570 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 NUP43Q8NFH3 380 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 PSMF1Q92530 271 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 TP53INP1Q96A56 240 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 VPS33AQ96AX1 596 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 WBP1Q96G27 269 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 NMUR2Q9GZQ4 415 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 ZNF552Q9H707 407 aaPredicted RBP13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 NTMQ9P121 344 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 LHX6Q9UPM6 363 aa13.53□□□□□ -0.24
SCAMP4-209ENST00000585335 RNF103-CHMP3A0A140T963 221 aa13.52□□□□□ -0.25
SCAMP4-209ENST00000585335 CAPN14A8MX76 684 aa13.52□□□□□ -0.25
SCAMP4-209ENST00000585335 WWP2O00308 870 aa13.52□□□□□ -0.25
SCAMP4-209ENST00000585335 NDUFAB1O14561 156 aa13.52□□□□□ -0.25
SCAMP4-209ENST00000585335 SCN2BO60939 215 aa13.52□□□□□ -0.25
SCAMP4-209ENST00000585335 ERN1O75460 977 aaKnown RBP13.52□□□□□ -0.25
SCAMP4-209ENST00000585335 ITGA10O75578 1167 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms