RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 FHL5Q5TD97 284 aa15□□□□□ -0.01
ERBB2-222ENST00000584908 SIAH3Q8IW03 269 aa15□□□□□ -0.01
ERBB2-222ENST00000584908 SULF2Q8IWU5 870 aa15□□□□□ -0.01
ERBB2-222ENST00000584908 ANKRD42Q8N9B4 389 aa15□□□□□ -0.01
ERBB2-222ENST00000584908 CDC26Q8NHZ8 85 aa15□□□□□ -0.01
ERBB2-222ENST00000584908 RAB3IL1Q8TBN0 382 aa15□□□□□ -0.01
ERBB2-222ENST00000584908 MTERF3Q96E29 417 aa15□□□□□ -0.01
ERBB2-222ENST00000584908 VIPAS39Q9H9C1 493 aa15□□□□□ -0.01
ERBB2-222ENST00000584908 DEPPQ9NTK1 212 aa15□□□□□ -0.01
ERBB2-222ENST00000584908 ARGLU1Q9NWB6 273 aaPredicted RBP15□□□□□ -0.01
ERBB2-222ENST00000584908 DTX4Q9Y2E6 619 aa15□□□□□ -0.01
ERBB2-222ENST00000584908 A0A087WV62 115 aa14.99□□□□□ -0.01
ERBB2-222ENST00000584908 PEX1O43933 1283 aa14.99□□□□□ -0.01
ERBB2-222ENST00000584908 SKAP2O75563 359 aaPredicted RBP14.99□□□□□ -0.01
ERBB2-222ENST00000584908 JUNP05412 331 aaKnown RBP14.99□□□□□ -0.01
ERBB2-222ENST00000584908 PCSK2P16519 638 aa14.99□□□□□ -0.01
ERBB2-222ENST00000584908 MAPK1P28482 360 aa14.99□□□□□ -0.01
ERBB2-222ENST00000584908 PTGER1P34995 402 aa14.99□□□□□ -0.01
ERBB2-222ENST00000584908 FRKP42685 505 aaPredicted RBP14.99□□□□□ -0.01
ERBB2-222ENST00000584908 RPL14P50914 215 aaKnown RBP14.99□□□□□ -0.01
ERBB2-222ENST00000584908 DCAF7P61962 342 aa14.99□□□□□ -0.01
ERBB2-222ENST00000584908 MRPS35P82673 323 aaKnown RBP14.99□□□□□ -0.01
ERBB2-222ENST00000584908 EXOSC7Q15024 291 aaKnown RBP14.99□□□□□ -0.01
ERBB2-222ENST00000584908 NTRK2Q16620 822 aa14.99□□□□□ -0.01
ERBB2-222ENST00000584908 ATP6AP1LQ52LC2 224 aa14.99□□□□□ -0.01
ERBB2-222ENST00000584908 RNFT1Q5M7Z0 435 aa14.99□□□□□ -0.01
ERBB2-222ENST00000584908 HLA-DQA1Q5Y7H0 255 aa14.99□□□□□ -0.01
ERBB2-222ENST00000584908 FAM9CQ8IZT9 166 aa14.99□□□□□ -0.01
ERBB2-222ENST00000584908 TAGAPQ8N103 731 aa14.99□□□□□ -0.01
ERBB2-222ENST00000584908 CPSF7Q8N684 471 aaKnown RBP14.99□□□□□ -0.01
ERBB2-222ENST00000584908 SIMC1Q8NDZ2 872 aa14.99□□□□□ -0.01
ERBB2-222ENST00000584908 OR9A2Q8NGT5 310 aa14.99□□□□□ -0.01
ERBB2-222ENST00000584908 PAQR8Q8TEZ7 354 aa14.99□□□□□ -0.01
ERBB2-222ENST00000584908 ARL8AQ96BM9 186 aa14.99□□□□□ -0.01
ERBB2-222ENST00000584908 BBS4Q96RK4 519 aa14.99□□□□□ -0.01
ERBB2-222ENST00000584908 SH3GL2Q99962 352 aa14.99□□□□□ -0.01
ERBB2-222ENST00000584908 REEP4Q9H6H4 257 aa14.99□□□□□ -0.01
ERBB2-222ENST00000584908 PRODH2Q9UF12 536 aa14.99□□□□□ -0.01
ERBB2-222ENST00000584908 DOPEY1Q5JWR5 2465 aa14.99□□□□□ -0.01
ERBB2-222ENST00000584908 GTF3C1Q12789 2109 aa14.99□□□□□ -0.01
ERBB2-222ENST00000584908 UTP20O75691 2785 aaKnown RBP14.99□□□□□ -0.01
ERBB2-222ENST00000584908 SPTAN1Q13813 2472 aaKnown RBP14.99□□□□□ -0.01
ERBB2-222ENST00000584908 ATP6AP2A0A1C7CYW4 349 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 PLOD2O00469 737 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 PEX11AO75192 247 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 SNNO75324 88 aaPredicted RBP14.98□□□□□ -0.01
ERBB2-222ENST00000584908 ATP6AP2O75787 350 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 CNR1P21554 472 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 NTSP30990 170 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 PPICP45877 212 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 MEOX1P50221 254 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 NR0B1P51843 470 aaKnown RBP14.98□□□□□ -0.01
ERBB2-222ENST00000584908 ALDH6A1Q02252 535 aaKnown RBP14.98□□□□□ -0.01
ERBB2-222ENST00000584908 ELOAQ14241 798 aaKnown RBP14.98□□□□□ -0.01
ERBB2-222ENST00000584908 EIF2S3LQ2VIR3 472 aaKnown RBP14.98□□□□□ -0.01
ERBB2-222ENST00000584908 KRTCAP3Q53RY4 240 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 BNC2Q6ZN30 1099 aaPredicted RBP14.98□□□□□ -0.01
ERBB2-222ENST00000584908 HDXQ7Z353 690 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 LRRC34Q8IZ02 419 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 FAM26EQ8N5C1 309 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 OR52R1Q8NGF1 315 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 HSPBAP1Q96EW2 488 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 ATP6V1G3Q96LB4 118 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 GPR137Q96N19 417 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 AMDHD1Q96NU7 426 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 TSSK3Q96PN8 268 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 PAIP2Q9BPZ3 127 aaKnown RBP14.98□□□□□ -0.01
ERBB2-222ENST00000584908 NXF5Q9H1B4 397 aaKnown RBP14.98□□□□□ -0.01
ERBB2-222ENST00000584908 GLIPR2Q9H4G4 154 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 SACM1LQ9NTJ5 587 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 ASIC5Q9NY37 505 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 NKIRAS1Q9NYS0 192 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 GIMAP2Q9UG22 337 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 BCAP29Q9UHQ4 241 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 BAIAP2L1Q9UHR4 511 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 NPFFR2Q9Y5X5 522 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 CHCHD2Q9Y6H1 151 aaPredicted RBP14.98□□□□□ -0.01
ERBB2-222ENST00000584908 NINQ8N4C6 2090 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 DOPEY2Q9Y3R5 2298 aa14.98□□□□□ -0.01
ERBB2-222ENST00000584908 SETXQ7Z333 2677 aaKnown RBP14.97□□□□□ -0.01
ERBB2-222ENST00000584908 CAPN14A8MX76 684 aa14.97□□□□□ -0.01
ERBB2-222ENST00000584908 TO15178 435 aa14.97□□□□□ -0.01
ERBB2-222ENST00000584908 ACOX3O15254 700 aa14.97□□□□□ -0.01
ERBB2-222ENST00000584908 WISP2O76076 250 aa14.97□□□□□ -0.01
ERBB2-222ENST00000584908 PSMG1O95456 288 aa14.97□□□□□ -0.01
ERBB2-222ENST00000584908 CCL3P10147 92 aa14.97□□□□□ -0.01
ERBB2-222ENST00000584908 PRPS2P11908 318 aa14.97□□□□□ -0.01
ERBB2-222ENST00000584908 ZNF24P17028 368 aa14.97□□□□□ -0.01
ERBB2-222ENST00000584908 NAGAP17050 411 aa14.97□□□□□ -0.01
ERBB2-222ENST00000584908 DRD5P21918 477 aa14.97□□□□□ -0.01
ERBB2-222ENST00000584908 TMED10P49755 219 aaKnown RBP14.97□□□□□ -0.01
ERBB2-222ENST00000584908 NCBP2P52298 156 aaKnown RBP eCLIP14.97□□□□□ -0.01
ERBB2-222ENST00000584908 NRG3P56975 720 aa14.97□□□□□ -0.01
ERBB2-222ENST00000584908 UBAP2LQ14157 1087 aaKnown RBP14.97□□□□□ -0.01
ERBB2-222ENST00000584908 SLC22A10Q63ZE4 541 aa14.97□□□□□ -0.01
ERBB2-222ENST00000584908 FBXW8Q8N3Y1 598 aa14.97□□□□□ -0.01
ERBB2-222ENST00000584908 OR2M7Q8NG81 312 aa14.97□□□□□ -0.01
ERBB2-222ENST00000584908 OR7G2Q8NG99 324 aa14.97□□□□□ -0.01
ERBB2-222ENST00000584908 KAT2AQ92830 837 aa14.97□□□□□ -0.01
ERBB2-222ENST00000584908 TUBGCP3Q96CW5 907 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms