RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 FKBP9O95302 570 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 ANP32DO95626 131 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 CLDN1O95832 211 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 DDAH2O95865 285 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 FGF5P12034 268 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 COX7A2P14406 83 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 XRCC1P18887 633 aaPredicted RBP9.63□□□□□ -0.87
SS18-221ENST00000582448 TIA1P31483 386 aaKnown RBP eCLIP9.63□□□□□ -0.87
SS18-221ENST00000582448 UBE2IP63279 158 aaKnown RBP9.63□□□□□ -0.87
SS18-221ENST00000582448 REEP5Q00765 189 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 MEF2AQ02078 507 aaPredicted RBP9.63□□□□□ -0.87
SS18-221ENST00000582448 TGM3Q08188 693 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 TRAP1Q12931 704 aaKnown RBP9.63□□□□□ -0.87
SS18-221ENST00000582448 BNIP2Q12982 314 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 TRIM25Q14258 630 aaKnown RBP9.63□□□□□ -0.87
SS18-221ENST00000582448 KCNAB1Q14722 419 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 RCN1Q15293 331 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 ANXA8L1Q5VT79 327 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 BICRALQ6AI39 1079 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 PWWP2BQ6NUJ5 590 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 ARMC6Q6NXE6 501 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 KLHL35Q6PF15 583 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 GPR180Q86V85 440 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 LINC01555Q8NAE3 123 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 TNIP2Q8NFZ5 429 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 OR4E2Q8NGC2 313 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 CLHC1Q8NHS4 586 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 SLC26A7Q8TE54 656 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 CHTF18Q8WVB6 975 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 WDR60Q8WVS4 1066 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 THAP4Q8WY91 577 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 RSC1A1Q92681 617 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 ASB9Q96DX5 294 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 ZDHHC12Q96GR4 267 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 RSRC1Q96IZ7 334 aaKnown RBP9.63□□□□□ -0.87
SS18-221ENST00000582448 FCRL1Q96LA6 429 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 TEX37Q96LM6 180 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 MENTQ9BUN1 341 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 MUC13Q9H3R2 512 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 PDE7BQ9NP56 450 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 ATAD3AQ9NVI7 634 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 TMEM181Q9P2C4 612 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 ZNF624Q9P2J8 865 aaPredicted RBP9.63□□□□□ -0.87
SS18-221ENST00000582448 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.63□□□□□ -0.87
SS18-221ENST00000582448 RARRES3Q9UL19 164 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 FARSAQ9Y285 508 aaKnown RBP9.63□□□□□ -0.87
SS18-221ENST00000582448 DLGAP4Q9Y2H0 992 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 WBP11Q9Y2W2 641 aaKnown RBP9.63□□□□□ -0.87
SS18-221ENST00000582448 PCDHGA6Q9Y5G7 932 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 ESPL1Q14674 2120 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 A0A1W2PPV9 198 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 C21orf140B9A014 251 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 AKAP10O43572 662 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 SH3BGRLO75368 114 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 ERN1O75460 977 aaKnown RBP9.62□□□□□ -0.87
SS18-221ENST00000582448 LRATO95237 230 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 SERPIND1P05546 499 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 CHRM5P08912 532 aaPredicted RBP9.62□□□□□ -0.87
SS18-221ENST00000582448 FOLR1P15328 257 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 CD1EP15812 388 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 TCN1P20061 433 aaPredicted RBP9.62□□□□□ -0.87
SS18-221ENST00000582448 IL12AP29459 219 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 GSTM5P46439 218 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 DGKQP52824 942 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 EEFSECP57772 596 aaKnown RBP9.62□□□□□ -0.87
SS18-221ENST00000582448 CSNK1G2P78368 415 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 ZNF763Q0D2J5 394 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 RAPSNQ13702 412 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 CEACAM7Q14002 265 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 CAPRIN1Q14444 709 aaKnown RBP9.62□□□□□ -0.87
SS18-221ENST00000582448 UGT8Q16880 541 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 TMEM35AQ53FP2 167 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 SPANXN4Q5MJ08 99 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 CPTPQ5TA50 214 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 KHDRBS2Q5VWX1 349 aaKnown RBP9.62□□□□□ -0.87
SS18-221ENST00000582448 JMJD6Q6NYC1 403 aaPredicted RBP9.62□□□□□ -0.87
SS18-221ENST00000582448 ZFP1Q6P2D0 407 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 SLC2A7Q6PXP3 512 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 IKBIPQ70UQ0 350 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 COMMD6Q7Z4G1 85 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 OOSP2Q86WS3 158 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 NUDT13Q86X67 352 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 TMEM132CQ8N3T6 1108 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 KRTCAP2Q8N6L1 136 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 RNF148Q8N7C7 305 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 ENDOVQ8N8Q3 282 aaKnown RBP9.62□□□□□ -0.87
SS18-221ENST00000582448 LMNTD1Q8N9Z9 388 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 HIPK4Q8NE63 616 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 SRFBP1Q8NEF9 429 aaKnown RBP9.62□□□□□ -0.87
SS18-221ENST00000582448 TRPV3Q8NET8 790 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 OR2L3Q8NG85 312 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 OR4K1Q8NGD4 311 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 OR2A1Q8NGT9 310 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 DNAJB14Q8TBM8 379 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 MR1Q95460 341 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 RGMAQ96B86 450 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 GBP5Q96PP8 586 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 KCTD14Q9BQ13 255 aaPredicted RBP9.62□□□□□ -0.87
SS18-221ENST00000582448 GPATCH1Q9BRR8 931 aaKnown RBP9.62□□□□□ -0.87
SS18-221ENST00000582448 EBPLQ9BY08 206 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms