RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 CNPPD1Q9BV87 410 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 NUDT9Q9BW91 350 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 CCDC106Q9BWC9 280 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 OR8D2Q9GZM6 311 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 OR10A5Q9H207 317 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 CXorf36Q9H7Y0 433 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 RMND5AQ9H871 391 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 DDX18Q9NVP1 670 aaKnown RBP11.8□□□□□ -0.52
MKS1-206ENST00000577824 PCDHGA9Q9Y5G4 932 aaKnown RBP11.8□□□□□ -0.52
MKS1-206ENST00000577824 GMEB1Q9Y692 573 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 CAPN7Q9Y6W3 813 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 SCN2AQ99250 2005 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 CPAMD8Q8IZJ3 1885 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 TRBV11-1A0A0K0K1C0 115 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 CCDC154A6NI56 674 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 BBIP1A8MTZ0 92 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 CAPN14A8MX76 684 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 MASP2O00187 686 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 NR5A2O00482 541 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 PRKNO60260 465 aaPredicted RBP11.79□□□□□ -0.52
MKS1-206ENST00000577824 DCTN3O75935 186 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 DNAJB5O75953 348 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 CD1EP15812 388 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 MAP3K8P41279 467 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 RNF4P78317 190 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 PRR5P85299 388 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 GAB1Q13480 694 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 MAPRE2Q15555 327 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 MAPKAPK3Q16644 382 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 TBR1Q16650 682 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 ST3GAL2Q16842 350 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 LRIF1Q5T3J3 769 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 GPR155Q7Z3F1 870 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 DPP10Q8N608 796 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 AMER2Q8N7J2 671 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 SIMC1Q8NDZ2 872 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 OR52R1Q8NGF1 315 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 DNAJB8Q8NHS0 232 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 C16orf52Q8NHV5 167 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 BCAS4Q8TDM0 211 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 BRIX1Q8TDN6 353 aaKnown RBP11.79□□□□□ -0.52
MKS1-206ENST00000577824 KAT2AQ92830 837 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 VPS33AQ96AX1 596 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 FAM120BQ96EK7 910 aaKnown RBP11.79□□□□□ -0.52
MKS1-206ENST00000577824 GIMAP5Q96F15 307 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 THOC3Q96J01 351 aaKnown RBP11.79□□□□□ -0.52
MKS1-206ENST00000577824 VSTM2LQ96N03 204 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 MS4A4EQ96PG1 132 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 BTBD9Q96Q07 612 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 PHF12Q96QT6 1004 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 SLC25A23Q9BV35 468 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 WWTR1Q9GZV5 400 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 CFL2Q9Y281 166 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 EPG5Q9HCE0 2579 aa11.79□□□□□ -0.52
MKS1-206ENST00000577824 KMT2BQ9UMN6 2715 aaPredicted RBP11.79□□□□□ -0.52
MKS1-206ENST00000577824 SMG1Q96Q15 3661 aaKnown RBP11.78□□□□□ -0.52
MKS1-206ENST00000577824 TRBV5-3A0A0A0MS03 114 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 TTC36A6NLP5 189 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 NDUFAB1O14561 156 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 EMC8O43402 210 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 ZFAND5O76080 213 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 SNRPB2P08579 225 aaKnown RBP11.78□□□□□ -0.52
MKS1-206ENST00000577824 EFNA1P20827 205 aaPredicted RBP11.78□□□□□ -0.52
MKS1-206ENST00000577824 ITGA3P26006 1051 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 GPC1P35052 558 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 CDKN2CP42773 168 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 TRPC1P48995 793 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 PSPHP78330 225 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 EXOSC7Q15024 291 aaKnown RBP11.78□□□□□ -0.52
MKS1-206ENST00000577824 VPS26BQ4G0F5 336 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 CRB2Q5IJ48 1285 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 IGFL2Q6UWQ7 119 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 SLC29A4Q7RTT9 530 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 ANKRD46Q86W74 232 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 SLC5A8Q8N695 610 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 CCDC197Q8NCU1 140 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 OR56A1Q8NGH5 318 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 OR4A15Q8NGL6 344 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 TTC9Q92623 222 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 ADIPOR1Q96A54 375 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 TP53INP1Q96A56 240 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 CRELD1Q96HD1 420 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 ITCHQ96J02 903 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 PANX1Q96RD7 426 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 SMAD5Q99717 465 aaKnown RBP11.78□□□□□ -0.52
MKS1-206ENST00000577824 NPAS2Q99743 824 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 PAIP1Q9H074 479 aaKnown RBP11.78□□□□□ -0.52
MKS1-206ENST00000577824 RNF32Q9H0A6 362 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 EPS8L2Q9H6S3 715 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 ZNF552Q9H707 407 aaPredicted RBP11.78□□□□□ -0.52
MKS1-206ENST00000577824 C3orf14Q9HBI5 128 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 ARMCX1Q9P291 453 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 MYOTQ9UBF9 498 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 PRODH2Q9UF12 536 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 TUBD1Q9UJT1 453 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 LEF1Q9UJU2 399 aaPredicted RBP11.78□□□□□ -0.52
MKS1-206ENST00000577824 DTX4Q9Y2E6 619 aa11.78□□□□□ -0.52
MKS1-206ENST00000577824 HEMK1Q9Y5R4 338 aaPredicted RBP11.78□□□□□ -0.52
MKS1-206ENST00000577824 A0A096LPI6 279 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms